Pseudomonas syringae pv. syringae B728a, Psyr_2485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_2485
Name
Replicon chromosome
Genomic location 2886987 - 2888450 (+ strand)

Cross-References

RefSeq YP_235562.1
GI 66045721
Entrez 3368002
INSDC AAY37524.1
NCBI Locus Tag Psyr_2485
UniParc UPI0000394B4B
UniProtKB Acc Q4ZTJ8
UniProtKB ID Q4ZTJ8_PSEU2
UniRef100 UniRef100_Q4ZTJ8
UniRef50 UniRef50_I7BVC0
UniRef90 UniRef90_Q881X6

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux system, outer membrane lipoprotein, NodT
Synonyms
Evidence for Translation
Charge (pH 7) -0.06
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 52889.0
Isoelectric Point (pI) 6.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003040 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_2485

Human Homologs

References

No references are associated with this feature.