Pseudomonas sp. WCS358, PC358_RS14195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. WCS358 WCS358-Sc2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGCCGCGAAAACTTCGGCGATGGCTTCGAGCGCATCTGCCAGGCCCTGGTGCAGACCGCTCGCCAGTTCCCGGATGTGGACGTGGTGTACCCGGTGC ACCTCAACCCCAACGTGCGCGAGCCGGTGAACCGCCTGCTGGCCGGGGTCAGCAACATCCACCTGATCGAGCCGCTCGACTACCTGCCGTTCGTCTACCT GATGAGCCGCTCGTACCTGATCCTCACCGACTCCGGTGGCATCCAGGAAGAAGCCCCAGCCCTCGGCAAGCCGGTACTGGTCATGCGTGACACCACCGAG CGCCCGGAAGCGGTCGCGGCTGGCACCGTCAAACTGGTTGGCACCGACGTCGACTCGATCCAGCAACACCTGGTGCAACTGCTCACCGATGAAGCGACCT ATCGCGAGATGAGCGTGGCCCACAACCCCTACGGCGACGGAAAAGCGTGCGCGCGAATCCTCGATGCCCTTTCCGTATTCTCTAACTCCAAGGACGCAGC
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| DNA Sequence for Gene |
>PC358_RS14195
ATGAGCTTCAACAAGATTTCTGTCGTAGGTCTGGGCTATATCGGCCTGCCAACTGCCGCCGTTTTCGCCGCCCGCAAGAAGCAGGTCATCGGCATCGACG TCAACCAGCACGCGGTCGACACCATCAACCGCGGCGAAATCCACATCGTCGAGCCTGAGCTGGACATGGTCGTTCACGCTGCCGTGACCGAAGGTTTCCT GCGTGCCTCCACCGTTCCGGAAGCTGCCGACGCCTTCCTGATCGCCGTGCCGACCCCGTTCATGGACGACCACGAGCCGGACCTGAGCTACATCGAGTCC GCCAGCAAAGCCATCGCTCCAGTACTGAAAAAGGGCGACCTGGTCATTCTGGAATCGACCTCCCCGGTCGGCGCCACTGAGCAGATGGCCTTCTGGCTGG CCCAGGCGCGCCCGGACCTGAGCTTCCCGCAGACCCACGGTGAAGACTCCGACATCCGCATCGCTCACTGCCCTGAGCGCGTCCTGCCAGGCCACGTACT GCGTGAGCTGGTCGAAAACGACCGGATCATCGGCGGCATGACCAAGAAGTGCTCGGACGCTGCCGTACGCCTGTACCGCACCTTCGTCGAAGGCGAGTGC ATCGTCACCAACGCCCGCACCGCCGAAATGTGCAAGCTGACCGAAAACAGCTTCCGTGACGTGAACATCGCGTTCGCCAACGAACTGTCGATCATCTGCG ACAAGCTGGACATCGACGTCTGGGAACTGATCCGCCTGGCCAACCACCACCCGCGCGTCAACATCCTGCAGCCTGGCCCAGGCGTAGGCGGCCACTGCAT CGCCGTCGACCCATGGTTCATCGTCAGCCAGACCCCAGAGCAGGCGCGCCTGATCCGTACCGCCCGTGTGGTCAACGACAGCAAGCCTGAGTGGGTGATC GACAAGGTCAAGATGGCCCTGGCCAACTTCCTGATCAAGAACCCGGGCAAATCGGCCCAGCAAGTCAAGATCGCCTGCTACGGCCTGGCCTTCAAAGCCG ACATCGACGACCTGCGCGAAAGCCCGGCCCTGAGCATTGCCGAGCGCCTGGGCAACGAGCTGGAAGCCACCCTGCAACTGGTCGAGCCGAACATCGAAGC CCTGCCGCAGCGCCTGTCGCGCCACGAGCACGTGGAATTCGACTTCGCCCAGGACAGCGCCGACATTCACGTGCTGCTGGTCAAGCACCGTGAATTCCGC GGCACCTTCACCGTCCGCGATGCTGCATTCGTGATCGACGCCGCAGGCGTTACCCAGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGGAACAGTCCGCATGAACAACACCACGCTTGAGAAACCTACCGTGAACAATGAGCTGCCGTCACCTTTGGCCGATATTCATGACCGTGTGATGGAAGCC TATTACGGCAAGCTGGGTGATCAGTTCATGCGGGAAACCCAAGCCCGCATCCACTGGATCTGCGCCCAGGTCAAAGGGCGCCGGATCCTGGATGTCGGCT GCTCGCAGGGCATCGTGCCCCTGCTGCTGGCACGTGAAGGCTGCCAGGTCACCGGTGTGGACACCAGCCCGCAGGCCATCGAAGAGGCCAAGGGTTACCT GTCGACCGAGCCGGCCCACATCCAGCAAAACGTCACGTATATCAATTCTGACTTCCTCGCGCTGGACACGCTCGAGGTCGAACCCGACACCGTCGTCATC AGCGAAGTACTCGAACACCTGGTCCGCCCGGAGCTGTTCGTCGAAAAGGCCAACGAACTGCTCAAGCAGGGTGGCCGCCTGGTGATCACCGTGCCGTTCG
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| Amino Acid Sequence |
>UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
MSFNKISVVGLGYIGLPTAAVFAARKKQVIGIDVNQHAVDTINRGEIHIVEPELDMVVHAAVTEGFLRASTVPEAADAFLIAVPTPFMDDHEPDLSYIES ASKAIAPVLKKGDLVILESTSPVGATEQMAFWLAQARPDLSFPQTHGEDSDIRIAHCPERVLPGHVLRELVENDRIIGGMTKKCSDAAVRLYRTFVEGEC IVTNARTAEMCKLTENSFRDVNIAFANELSIICDKLDIDVWELIRLANHHPRVNILQPGPGVGGHCIAVDPWFIVSQTPEQARLIRTARVVNDSKPEWVI DKVKMALANFLIKNPGKSAQQVKIACYGLAFKADIDDLRESPALSIAERLGNELEATLQLVEPNIEALPQRLSRHEHVEFDFAQDSADIHVLLVKHREFR GTFTVRDAAFVIDAAGVTQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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