Strain | Pseudomonas sp. WCS374. [Details] | |
DNA Sequence Upstream of Gene |
ACACAACAAGCTCTACCTGGCCACCAAAGCCAGCAAGCTCGATCACATGATGGGCAACGAGCACCAGGGCGAGGTCGACCGCGCGTGACCCGTGGCCAGG TGAAACGGCGACTGTCCTTCAACTGGTGGCAGTACCTGGCCCTGGCATTGCTGCCGTTGTTCGTGATCAACCTGCTGTTTGGCCGGGCTGAATCCTTGTT GCCCGTCTTGGCCATGCCGTTCTTCATCGCCGGCGTGGCCTCGATGTTTCTCAGCCTGCGTTATTTTCACGCCTACAAACACGCGCTGATCGCCACCTCC AAAGCCCTTGATACTGCTCAAGAGCCCGCAGCCTGGATCACCCTGGCGGCGCGTCGGCGCACGGCGTTGCTGGTTGCAGCGTTACCGGCCTGGATTGGCG CGCTGGCGGTGTTCGTCGGCCTGGAGGCAGTGCCGCTGTTTCTGTTGGCGCTGTCGACGCTGGTGTTGTTCTATCTCTATCGCATACCGCGTCAGTTGGG
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DNA Sequence for Gene |
>PD374_RS03335
ATGAAGCGCTATTGGCTGGCGCTGCTGCTGGTATTCAGTGCCCAGGGCTGGCCGGTCGAGCGGGTTGTCAGCCTGGCGCCGTCACTGTCTGAAATCGTGC TTGAGCTGGGTGCCGAGGACTTGCTGGTCGGCATGCTTGATGGTGGTGACCGCCCGGCGGCGTTGGCGAAGGTGCCCTCGGTCGGGCACTACGGCCAGTT GGACATGGAGCGCCTGCTCAGCCTCAAGCCCGACCTGATCCTGCTCTGGCCTGGCAGCGTCGGCCCGGCCCAGCGCAAGCAGCTCCAACGATTGAATATC CCGGTGTACGTCGCCGAACCCCACAGCCTTGAACAACTGACCGCGCAGGTGCAGGCCATTGCCGAGCAATTGGGCCGCGCCGAGGCCGGGCACCAGCGCT CGGCACAATTGCGCCAGCGCTTGGCCGAGTTGCGCCAGCGCTACCAGCGGGCCGAGCCGCTGCGAGTGTTCTACCAAGTGTGGAACCAGCCGCTGTACAC CGTGGGCGGTGGGCAGATCATCAGCGATGCCCTCAGCGTGTGCGGGGCGCGCAATGTGTTTGATGACCTGAAGTTGCCGGCGCCGCAGGTGAATATCGAA TCGGTGTTGGCGCGAGACCCCGAGGTGATCCTGGTGGGGGATCAGGCTCAGAAGGAGGCCTGGAAGGCATGGCCGGCGATGGCTGCTCGGGTGCGGTTGG TGCCGGACAAGGGCCTTGAGCGGCCCAGCGGGCAGATGTTGGAGGCGGTGGGGCGGTTGTGCCAGGTGATTGCGCCGAACCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAACGCTATCGCAGGCAAGCCAGCTCCCACAGGGGAATGCATTTCAATTGTGGGAGCTGGCTTGCCTGCGATGACGCCGGTTCAGATTACTTAAAGCTCG GGTGTCCACGTCACCCCGAACATCCACACCCGACCTTCTTCACGATAATTCTGGTTTTCCCCGAGGTAGCTGTACTTCGCCCGTGCATAAGACTTGTCCA GCGCGTTATCCACCTTCAGCGACAACGACACCTCCCGGTTCAACGCCCAACTACTGCGCAGCCCCAACAAGGCATAACCGCCCAGACGGTTGCGGTTGGC TTCATCGTCGTAGCTGCTGCTGATCGCTTGCCAGCTGGCGCCGAGACCGAGTTGATCAAATTGCCGGTCCAGATCCAGGTTCACCGTTCGCCGTGCGCGA CGTGCCAGGGTGTGGCCGCTGTCACGGTCACGCGGGTCGATAAGCGACAGGCCCAGGTTGCCCTGCCAGCCAAACAGTTCTTGCTTGAGCGCCGCTTCAA
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Amino Acid Sequence |
>iron-hydroxamate ABC transporter substrate-binding protein
MKRYWLALLLVFSAQGWPVERVVSLAPSLSEIVLELGAEDLLVGMLDGGDRPAALAKVPSVGHYGQLDMERLLSLKPDLILLWPGSVGPAQRKQLQRLNI PVYVAEPHSLEQLTAQVQAIAEQLGRAEAGHQRSAQLRQRLAELRQRYQRAEPLRVFYQVWNQPLYTVGGGQIISDALSVCGARNVFDDLKLPAPQVNIE SVLARDPEVILVGDQAQKEAWKAWPAMAARVRLVPDKGLERPSGQMLEAVGRLCQVIAPNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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