Pseudomonas sp. WCS374, PD374_RS03335
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01497 | Periplasmic binding protein | IPR002491 | ABC transporter periplasmic binding domain | 22 | 216 | 1.2E-26 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 139 | 258 | 6.6E-29 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 17 | 136 | 3.0E-30 |
| CDD | cd01144 | BtuF | - | - | 20 | 255 | 3.77969E-75 |
| Coils | Coil | Coil | - | - | 110 | 147 | - |
| NCBIfam | NF038402 | NCBIFAM: helical backbone metal receptor | - | - | 21 | 218 | 2.3E-15 |
| SUPERFAMILY | SSF53807 | Helical backbone metal receptor | - | - | 18 | 259 | 4.71E-56 |
| PANTHER | PTHR30535 | VITAMIN B12-BINDING PROTEIN | - | - | 18 | 219 | 7.4E-38 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.