Pseudomonas syringae pv. syringae B728a, Psyr_0209
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. syringae B728a chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCAGCAAGAGCAATACAGCGAACTTTTTCAGGAGTTGCTGGCCTGATCGAACCGTTTCCAGACATCAGGCAACAGGTTAAAAGCATGCCGTTGGTGGCA TGCCGCTTGATGACTGGTGCTGTACGCTTGTAAACTACCGAGTCCGCTCGCCCATCCGGGCATCGCGCATCCGCATTTGCTACGAGGAATACCCATGGCC CGCGTAACCGTTGAAGACTGCCTAGAACACGTGGATAACCGCTTTGAGCTGGTCATGCTCTCTACCAAGCGTGCCCGTCAACTGGCAACCGGCGGCAAAG AACCAAAGCTGGCCTGGGAAAACGACAAGCCTACCGTTATGGCCCTGCGTGAAATCGCGGCTGGCGTAATGGATTACTCTGTAATCGCAGAAGCTGAAAT CGTTGAAGATGAGCCATTGTTCGCAGCGTTCGAGGACGAGTCCAACGAGGCCGTCTAAGCCTATGCCAGGTCGACGTAGTACGGCGCAGGGTAAAAGCCA
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| DNA Sequence for Gene |
>Psyr_0209
TTGGCAAGGGGTAGCGCCTTGCCGAGCATAGACGCCCTCGCCGACAGACTGTCGGCCTACCTCGGCAAGGACCAGGTCAATCTGGTCCGCCGAGCGTATT TCTACGCCGAACAAGCCCACGATGGCCAACGCCGTCGCAGCGGTGAAGCCTACGTCACCCATCCTCTCGCGGTGGCGAACATTCTTGCCGATATGCACAT GGACCATCAGAGCCTGATGGCTGCGATGCTGCATGACGTCATCGAAGACACCGGGATTGCCAAGGAAGCGCTCAGCGCCCAATTTGGCGAGACCGTCGCG GAACTGGTCGACGGGGTCAGCAAACTGACCCAGATGAATTTCGAGACCAAGGCCGAAGCCCAGGCGGAAAACTTCCAGAAAATGGCCATGGCCATGGCGC GCGACATTCGCGTCATCCTGGTCAAGCTCGCTGATCGCCTGCACAACATGCGCACGCTGGAAGTCCTGTCCGGCGAAAAGCGTCGGCGCATCGCCAAGGA AACCCTTGAAATCTATGCGCCCATCGCCAATCGGCTGGGCATGCACAGTGTGCGCATCGAATTCGAGGACCTGGGCTTCAAGGCGATGTACCCGATGCGT TCCTCGCGAATCAACCAGGCGGTCAAGCGCGCCAGGGGCAATCGCAAGGAACTGGTCAACAAGATCGAAGAGTCCCTGAGTCATTGCCTGGCCGTCGATG GCATCGAAGGCGACGTCAGTGGGCGGCAGAAACATCTGTATGGCATCTACAAGAAGATGCGCGGCAAGCGTCGCGCCTTCAACGAGATCATGGATGTCTA CGCGTTCCGCATCATCGTCGACAAGGTCGACACCTGCTATCGCGTGCTCGGCGCTGTACATAATCTGTACAAGCCGCTGCCCGGTCGCTTCAAGGATTAC ATCGCGATCCCCAAGGCCAACGGCTATCAGTCCCTGCACACGACATTGTTCGGCATGCATGGCGTGCCTATCGAGATCCAGATTCGCACCCGCGAAATGG AAGAAATGGCCAACAACGGTATCGCGGCACACTGGCTGTACAAGTCCAGTGACGACGAGCAGCCCAAGGGCACTCACGCCCGGGCCCGACAATGGGTCAA GGGCGTGCTGGAAATGCAGCAGCGCGCCGGCAACTCGCTGGAATTCATCGAAAGCGTCAAGATCGACCTGTTCCCGGACGAGGTCTACGTTTTCACGCCC AAAGGCCGGATCATGGAGCTGCCCAAAGGCTCCACAGCGGTGGATTTCGCCTACGCGGTACACACCGATGTCGGCAACAGCTGCATTGCCTGCCGGATCA ACCGCCGGCTGGCGCCGCTTTCCGAACCGCTGCAAAGTGGCTCGACCGTCGAGATCGTCAGCGCTCCAGGCGCACGCCCGAACCCGGCCTGGCTGAACTT TGTCGTCACCGGCAAGGCGCGTACCCACATTCGTCACGCACTCAAGCTGCAACGCCGTTCCGAGTCGATCAATCTGGGCGAGCGCCTGCTGAACAAGGTC CTCAACGGGTTTGAGTGCAGCCTCGACAAGATCGGTCAGGAGCGCATTCAACTGGTGCTCAACGAATACCGGGTCGAAGTGCTGGAAGACCTGCTCGAAG ACATCGGCCTGGGTAATCGCATGGCTTATGTCGTTGCCCGCCGCCTGCTGGGCGAAGGCGATCAGTTGCCAAGCCCTGAAGGCCCGCTGGCGATTCGTGG CACCGAAGGCCTGGTGCTCAGCTACGCGAAATGCTGCACGCCAATCCCGGGCGACCCGATTGTCGGCCACCTGTCTGCAGGCAAGGGCATGGTCGTGCAC CTGGACAACTGCCGCAACATCAGCGAAATCCGCCACAACCCGGAAAAATGCATCCAGCTGTCCTGGGCCAAGGACGTGACGGGCGAATTCAACGTCGAAC TGCGCGTCGAACTCGAGCATCAGCGCGGCCTGATCGCGCTGCTGGCCAGCAGCGTCAACGCGGCGGACGGCAATATCGAAAAAATCAGCATGGACGAACG CGATGGTCGCATCAGCGTGGTCCAACTGGTGGTCAGCGTGCACGATCGCGTGCACCTGGCTCGTGTGATCAAGAAACTGCGCGCCCTGACCGGTGTCACA CGCATCACCCGGATGCGCGCGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATCCCACTATCAGGAGTTCTCATGACCAAGACTGTCATCACCAGCGATAAAGCCCCTGCGGCCATTGGCCCTTACTCACAGGCCATCAAAGCTGGCA ATACCGTCTACATGTCCGGACAGATCCCGTTGGACCCGAGCACCATGGAACTGGTCGAGGGCATCGAAGCCCAGATCACTCAGGTCTTCGAAAACCTCAA GTCGGTTGCCGAAGCAGCGGGCGGATCGTTCAAGGACATCGTCAAACTGAACATCTTTCTGACCGATCTGGGCCACTTCGCCAAGGTCAACGAGCTGATG AGCACCTACTTCACTCAGCCTTATCCGGCTCGTGCAGCCATCGGCGTTGCGGCCCTGCCGCGTGGCGCCCAGGTTGAAATGGACGCGATTCTCGTCATCG AATAAATCCCCGACGGAGCGTGCCTTGCGCTCCGTTCTCCCTGAAGGAAGGAATCCGTTATGCGCTCCGCGCTCGCCATCTCGCTGCTCGCCGTCATTCT
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| Amino Acid Sequence |
>RelA/SpoT protein
MARGSALPSIDALADRLSAYLGKDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVA ELVDGVSKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHSVRIEFEDLGFKAMYPMR SSRINQAVKRARGNRKELVNKIEESLSHCLAVDGIEGDVSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDY IAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSDDEQPKGTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTP KGRIMELPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESINLGERLLNKV LNGFECSLDKIGQERIQLVLNEYRVEVLEDLLEDIGLGNRMAYVVARRLLGEGDQLPSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVH LDNCRNISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVT RITRMRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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