Pseudomonas chlororaphis EA105, NZ35_RS23900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_31, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGACAACCAGGTCAACCCGAAAACCGGCACCATCCGTGGTCGCGCGGTGTTCGACAACAGCGACGGCACTTACACCCCCGGCCTGTACGCACGCCTGAA ACTGGTCGGCAGCGGCACCTACAACGCCATGCTGATCAACGACGAAGCGGTCGGTACCGACCTCGGCAAGAAATTCGTGCTGGTGATGGATGCGGACAAC AAAACCGCGTACCGCGCCGTCGAACTGGGTCCGAAAATCGAAGGCCTGCGCATCGTCCGTAACGGCCTGAACAAGGACGACACGATCATCGTCAAGGGTC TGCAACGAGTTCGTCCTGGCTCACCGGTCACGCCTGAAGTGGTGCCGATGGCCAGCGAACAGACCATCGCTGCACTCGCTCAACAACGTCAAGCGCTGGA AGCCAGCAACCTGCCCAAAGTCGCCCCTGCCAAAGGCGCGTCCGGTGCGGTTGTGAAGCTGGCTGCTACGACCCCACGCGGTTAAGGGACGACAACTCCG
DNA Sequence for Gene
>NZ35_RS23900
ATGAATTTTTCCCAATTCTTCATTTCACGGCCGATCTTCGCAGCGGTGCTCTCGCTGTTGATCCTGATCGCCGGTGCGATCTCGCTGTTCCAGCTACCGA TCAGCGAATACCCGGAAGTCGTGCCTCCCACCGTGGTGGTGCGTGCCAACTTCCCGGGCGCCAACCCAAAAGTCATCGGTGAAACCGTGGCTGCTCCGCT GGAGCAAGCCATCACCGGCGTCGAGAACATGCTCTACATGTCCTCGCAGTCGACCGCCGACGGCAAGATCACCCTGACCATCACCTTCGCCCTGGGCACT GACCTGGACAACGCGCAGGTGCAGGTGCAAAACCGGGTGACCCGTACCGAACCGAAGCTTCCCGAGGAAGTGACGCGCATCGGTATCACCGTCGACAAGG CCTCGCCCGACCTGACCATGGTTGTGCACTTGACCTCCCCGGACAAGCGCTACGACATGCTCTACCTGTCCAACTACGCGATCCTCAACATCAAGGATGA GCTCGCTCGTCTGAACGGTGTCGGTGATGTGCAGTTGTTTGGTATGGGCGATTACTCGCTGCGTGTCTGGCTCGACCCGAACAAGACTGCTTCGCGCAAT CTGACTGCAACCGACGTGGTCACCGCCATTCGTGAGCAGAACCGTCAGGTGGCGGCCGGTCAATTGGGTGCGCCCCCTGCCCCGAATGCCCAGAGCTTCC AGCTGTCGGTCAACACGCAGGGCCGTCTGGTCAGCGAGGAAGAGTTCGAGAACATCATCATTCGCGCAGGCGACAATGGTGAGATCACTCGTCTCAAAGA CATCGCTCGCGTTGAACTGGGCTCCAGTCAATACGCCCTGCGCTCGTTGCTGGACAACCAACCGGCGGTGGCCATCCCGATCTTCCAGCGCCCTGGCTCC AATGCCATCGACATCTCGAACGAAGTTCGCGGCAAGATGGACGAGCTGAAGAAAAACTTCCCGCAAGGCATGGATTACAGCATCGTCTATGACCCGACGA TCTTTGTGCGCGGTTCGATCGAGGCGGTGGTTCACACCCTCTTCGAAGCACTGATTCTCGTGGTACTGGTAGTGATCCTGTTCCTGCAAACCTGGCGCGC CTCGATCATTCCGTTGGTGGCGGTGCCGGTATCGTTGATCGGTACGTTTGCGGTAATGCATCTGTTCGGCTTCTCGCTCAACGCGCTGTCCTTGTTCGGA TTGGTGCTGGCCATCGGTATCGTGGTCGACGACGCCATCGTGGTGGTGGAGAACGTCGAGCGCAATATCGAGCTCGGATTGAATCCGGTCGAAGCCACCA AGCGCGCCATGCGCGAAGTAACCGGTCCGATCGTTGCCACGGCGCTGGTGCTGTGTGCGGTGTTCATTCCGGCGGCGTTCATTTCCGGTCTCACCGGGCA GTTCTACAAACAGTTCGCCCTGACCATCGCCATCTCGACCGTGATCTCGGCGTTCAACTCGCTGACCCTGTCGCCGGCACTGGCCGCTGTGTTGCTGAAA AGTCATGACGCACCGAAAGACCGCTTCTCCAAGGTGCTCGACAAGATCTTCGGTGGCTGGTTGTTCCGTCCGTTCAACCGTTTCTTTGATCGTGCCAGCC ATGGTTACGTCGGCACCGTGCGCCGGGTTATCCGTAGCAGCGGCATCGCCCTGCTGTTGTACGCAGGCCTGATGGTGCTGACCTTCTTCGGTTTCTCCAG CACGCCGACCGGATTCGTACCGGGCCAGGACAAGCAATACCTGGTGGCTTTCGCGCAACTGCCCGATGCTTCGAGCCTGGATCGCACCGAAGAAGTCATC AAGCGCATGTCGGACATGGCGCTGAAACAGCCAGGCGTGGAAAGTGCCGTAGCGTTCCCGGGGCTGTCGATCAACGGCTTCACCAACAGCCCGAACGCCG GCATCGTCTTCGTGACGCTTAAACCGTTCGACGAGCGTAAAGACCCGAGCATGTCCGCCGGTGCAATCGCCGGTGCCTTGAACGGCCAGTACGCGAACAT TCAAGAGGCGTACATGGCGATCTTCCCGCCACCGCCGGTACAAGGTCTGGGCACCATTGGTGGTTTCCGTCTGCAAATCGAAGACCGGGGCAACCTGGGC TACGACGAGCTGTACAAAGAAACCATGAACATCATCAACAAGAGCCACAGCGTGCCGGAACTGGCCGGCCTGTTCACCAGTTACACGGTGAACGTGCCAC AGGTCGATGCCGCCATCGACCGTGAAAAAGCCAAGACCCACGGCGTGGCCGTCAGCGACATCTTCGACACCCTGCAGATCTACCTGGGCTCGCTGTATGC CAACGACTTCAACCGCTTCGGGCGCACCTATCAGGTCAACGTTCAGGCCGAGCAGCAGTTCCGCCTCGAATCCGATCAGATCGGTCAACTGAAAGTCCGT AACAACAAAGGCGAAATGATCCCGCTGGCGACCTTCATCAAGGTCAGCGACACCTCGGGCCCGGATCGCGTGATGCACTACAACGGCTTCATCACCGCAG AAATCAACGGTGCCGCCGCCCCGGGCTACAGCTCCGGCCAGGCCGAGAAAGCCATCGAGAAACTGCTCAAAGATGAACTGCCGAACGGCATGACCTACGA GTGGACCGACCTGACCTACCAGCAGATTCTGTCCGGCAACACCGCGCTGTTCGTGTTCCCGCTTTGCGTACTGCTGGCGTTCCTCGTGCTCGCCGCTCAA TACGAAAGCTGGAGCCTGCCACTGGCGGTGATCCTGATCGTACCGATGACCCTGCTGTCGGCCATCACCGGCGTGATCATCTCGGGAGGCGACAACAACA TCTTTACCCAGATCGGCTTGATCGTACTGGTGGGACTTGCCTGTAAGAACGCGATTCTGATCGTCGAATTCGCCAAGGACAAACAGGAAGAAGGCCTCGA CCCGCTCGCAGCGGTACTGGAAGCCTGCCGCCTGCGTCTGCGGCCAATCCTGATGACCTCCTTCGCGTTCATCATGGGTGTGGTGCCACTGGTGTTCTCC AGCGGTGCCGGTGCCGAGATGCGTCACGCCATGGGTGTGGCGGTGTTCTCCGGGATGCTCGGGGTGACCTTCTTCGGTCTGTTGCTGACGCCAGTGTTCT ACGTACTGATCCGTAACTTTGTCGAACGCGGCGAAGCCCGCAAAGCGGCCAAAGCTCTGAAACTGGAGGCGCAACAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTTAAAGTCTTCCTGCCGAGTCTGCTGGTGCTGGCCCTCAGTGCCTGCGCCGTTGGCCCCGACTACAAGACCCCTGCCACGGAGGCGGCCAATATCAC GGCCGTCACCGACGGCGCCGCCGGGCAAAAGAACTTCGACCGTTCGAAATTCGAAGGAATCTGGTGGCAGCAATTCGACGATCCGACCCTCAACCAGTTG GTGACCCAATCGCTGCAAGGCAACCGTGAACTGCGCGTGGCATTCGCCCGCTGGAAAGCCGCCCGGGCGATCCGCGACGATGCCAGCAACGATGCGATGC CGACCATCACCAGCCGCGCCAGCAGTGATCTGGCCAAGGGGCAAATCCCTGGCCAGACCACCGACCGGGTCAACAGTGAGCGTTATGATCTCGGTCTGGA CATGGCCTGGGAGCTGGACCTGTTCGGCCGCATCCAGCGCAATCTGGAAGCCAGCGACGCCGACCAGCAAGCGGCCGAAGCCGATCTGTACCAACTGCAA
Amino Acid Sequence
>transporter
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGT DLDNAQVQVQNRVTRTEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLNGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVTAIREQNRQVAAGQLGAPPAPNAQSFQLSVNTQGRLVSEEEFENIIIRAGDNGEITRLKDIARVELGSSQYALRSLLDNQPAVAIPIFQRPGS NAIDISNEVRGKMDELKKNFPQGMDYSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLNPVEATKRAMREVTGPIVATALVLCAVFIPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK SHDAPKDRFSKVLDKIFGGWLFRPFNRFFDRASHGYVGTVRRVIRSSGIALLLYAGLMVLTFFGFSSTPTGFVPGQDKQYLVAFAQLPDASSLDRTEEVI KRMSDMALKQPGVESAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGALNGQYANIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLG YDELYKETMNIINKSHSVPELAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVNVQAEQQFRLESDQIGQLKVR NNKGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEKAIEKLLKDELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIISGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQEEGLDPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNFVERGEARKAAKALKLEAQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site