Pseudomonas chlororaphis EA105, NZ35_RS18770

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis strain EA105 contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCACAGCAACGGCGTGCTCAGTCGTCTGAAACCGTCGGCGATTGAAGACCACCCGCTACCTGGCCCGAAAGGTCGCGGGGCGATTCTGCTGCGTTTCG GCGAAGGCCCGGAAGCGCTGGTGGTGGTGATGATGCACCTGGCCCTTGGCGCGCGAACCCGCAGCCTGCAACTGGCCTATATTCGAGAGCTGATCGGTGG CTATAAACACCAAGTGTTGATGGGCGACATGAACACCCATGCCAGCGATCTGCTACAACATTCTCCGTTACGCGATCTCGGCCTGCTGGCCCCGCAGGTG GAAGCGACATTCCCCAGCTGGCGCCCGCAGCGTTGCCTTGATCATATTTTGCTCAGCCCGACCCTGACCCTGGAAAAGGTCGAAGTGCTGGCACAACCGA TTTCCGATCACCTGCCGGTCGCGGTAGAGATTCGTCTGCCGGGTTCGCTCACGGCCGATGCATTGCCCGCGTTGAGTCCTGCCCCTCGCGGAACCCCTGA
DNA Sequence for Gene
>NZ35_RS18770
ATGAGCGACGACGCCCAGCGCTGGAAAGAGAAGTACCTCAAAAGCATTGAACAACAAGACAAACTCGAACGTCGCTGGGCCGCCAGGCTCGATTTGTTGC GTCGCGGCCTGGTGCGCAGCACGCTGGCGGCCGAAGGCACCGATAAAGTCGTTGATCAGTGCATGAAAGAGATGCGCGACGTGGTGCGCACCGACGACAT GGACGCCGGCCTCGCCGCCCTGCTGCCGCGCCTGGAAAAAGCCGTGCTCGACTCCGAGCAGCGCCGCGAAACCCGCATCGATCAGGTCAGCACCGCGCTG ACGTCGCTGGTCACCCAGTTGCAGGCATTGCCGTTGCCGCGTGAAGTCGCTCAGCCACTGAAGAAATTCGCCAAACAACTGGATGGTCGCGTTGGGTCTG CGCGGGAAATGCCATTGCTGTTGAGTGAACTCAGCGGCTTGCAGGGCAAGGCATTGAGTCAGCTGGAAACGCCCGCAGAGCCGGGTCGTCCGGGCCTGTT GCAGCGTTTGTTTGGTAGCCGTGATAGCGAAGAGGCGCCCGCCAAAGAATCACCCGCACCGACTCAGGTCGCGCAGCCGCTTGCTGCCCCACTGCCTGAA CCGGAAACCGCAGAGCCGGCCCCTATCGCAGCGATTGAACCGGTGACGGCGGCTCCCGCCCTCGAAACCCCAGTGCCTGTCGAAAAAACAGCGCCAGCCA CGCAAAACCGGCTGGAAGTGGAAGAAGTGGTGGCTTTCGAGCCGCCCACGGTCGTCAGCGAAGTTATCAGTGACCCGACCGAGCCCAAGGCCGAGCACTT TGAACCCGAGCCTGTTTTCGCGGCAGCTCCAGCTCACACGCAGATCACGCCTGCCGCCATCAATCCTGATGAACTGATCCACCCCGGTGATCCAGCGCCG CTGACCCTCGACAGCCTGCCCCTGCCAGAACCCATCGCGCAGGCGCTGGCCGCCATCGACCCGGAGCAATCCGAACACGACATCCTGTTCGCCCTGCCGG ACACCCCGGAGCCGTCCTACAGCTCCGTGGCCAAGCACATCGAGGACACCCTGATCGGTCTCCTCGACGACCTGACCCTGCCAGAACGTCACCGCCCGCA AGCCGAAGCCATGCGCGAAAGGCTCAAACACGGTTTGAACTGGTACGAACTGATCCCGATCCTCGACGATCTCGCGACATTGATGCTGGCAATCACCGAC AGCGGTCAGCACGAGTTCGAAGCGTATCTGCAGCAACTCAACGAACGCCTCGAAGCGTTCCAGAGCAATCTGCAAGCTGCCAGTGAAGGTCACGCCGATA ACAGCTCGGCAGCGCGGGCGATGGATACGCAGATCCGCGAGCAAGTCGATGGCTTGCAGACCAGTGTCCAGGAAGCCGCCGACCTCGATGACCTCAAGCA AGTGCTGGAGAACCATCTCGAAGGCCTGCTCGGCACCATGGACCAGCACCAGAAGCAGCGCGATGCCCGCGAGCAAGAAGTCGCCACGCGACTGAAAAGC CTGTCTGAGCGCGTGGCGCATATGGAGCAGGAAGCCCAGGGTTTCCGCGAACATCTTGAAGTGCAAAGGCAGAAAGCCTTGATCGATCCGCTCACCGGCC TGCCTAACCGCGCCGCGTGGAGCGAACGCCTCGAGCATGAAATCAAGCAGTGGCAGCAACACGGCAACACCCTGAGCCTGGCGATGCTCGACCTTGATCA CTTCAAACGGATCAATGACAACTACGGCCATCTGGCCGGCGACAAGGTCCTGAAAATCATTGCCACTGTGTTGCGCAAACGCCTGCGCGGCTCCGACTTC ATTGCCCGTTTCGGCGGGGAAGAGTTCGTTCTGTTGATGCCGGCAACGCCGCCAGCCGTCGGCGCCAAACTGCTGGAAACCCTGCGCGCAGCGATCGAAG CCTGCCCGTTCCACTTCAAGGGCGAGCGGGTGACCATCACCATCTCCATGGGACTGGCAACATTCCGCGCTGGAGAACACAGCGATCTGGTGCTGAAAAG AGCCGATCAGGCGCTATACCGGGCAAAAAATGCGGGACGCAACCGGGTCGAGCTGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAATTTGTTCCATTTTGTTTAAATCCGCCCGCTGACCGTCGAGACGCAAGGCAGTACGTTACACTGTTGCATTACTGTCTTGCGTGTACTGCCTTCTGC CATGAAATTCTTTGCCCTACTCGCTTCGCTGCTCGTTCTGGCCGGTTGTGCCAGCGGCCCGCGCTACAACACCAGCCATCCTTCGGCCAATTACGACAGC CGCATTCAGTTTGTGGTCGTGCATTACACGTCGGCCTCGCTGGAGCGCTCGCTGCAATTGCTGACCCATGGCGAAGTCAGCAGTCATTACCTGATCGGCG ACGACAAGAGCGGCACCATTTACAAACTGATGGATGAAAACCAGCGCGCTTGGCACGCCGGCGAAAGCCAGTGGCAGGGCCGTACCTGGCTGAACTCCAG CTCCATCGGCATTGAAATCGTCAACCCGGGCTTCAAGGACACGCCGACCGGACGTCTGTGGTATCCGTACAGCGAAGCGCAGATCCAATCGTTGATCGCC
Amino Acid Sequence
>DeoR faimly transcriptional regulator
MSDDAQRWKEKYLKSIEQQDKLERRWAARLDLLRRGLVRSTLAAEGTDKVVDQCMKEMRDVVRTDDMDAGLAALLPRLEKAVLDSEQRRETRIDQVSTAL TSLVTQLQALPLPREVAQPLKKFAKQLDGRVGSAREMPLLLSELSGLQGKALSQLETPAEPGRPGLLQRLFGSRDSEEAPAKESPAPTQVAQPLAAPLPE PETAEPAPIAAIEPVTAAPALETPVPVEKTAPATQNRLEVEEVVAFEPPTVVSEVISDPTEPKAEHFEPEPVFAAAPAHTQITPAAINPDELIHPGDPAP LTLDSLPLPEPIAQALAAIDPEQSEHDILFALPDTPEPSYSSVAKHIEDTLIGLLDDLTLPERHRPQAEAMRERLKHGLNWYELIPILDDLATLMLAITD SGQHEFEAYLQQLNERLEAFQSNLQAASEGHADNSSAARAMDTQIREQVDGLQTSVQEAADLDDLKQVLENHLEGLLGTMDQHQKQRDAREQEVATRLKS LSERVAHMEQEAQGFREHLEVQRQKALIDPLTGLPNRAAWSERLEHEIKQWQQHGNTLSLAMLDLDHFKRINDNYGHLAGDKVLKIIATVLRKRLRGSDF IARFGGEEFVLLMPATPPAVGAKLLETLRAAIEACPFHFKGERVTITISMGLATFRAGEHSDLVLKRADQALYRAKNAGRNRVELG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site