Pseudomonas chlororaphis EA105, NZ35_RS18770
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 531 | 684 | 1.41E-50 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 517 | 685 | 3.0E-59 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 520 | 685 | 8.9E-54 |
| Coils | Coil | Coil | - | - | 5 | 25 | - |
| Coils | Coil | Coil | - | - | 466 | 486 | - |
| Coils | Coil | Coil | - | - | 403 | 430 | - |
| Coils | Coil | Coil | - | - | 491 | 518 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 174 | 193 | - |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 526 | 682 | 4.1E-47 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 527 | 683 | 3.01794E-67 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 390 | 684 | 1.2E-71 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 512 | 686 | 4.5E-59 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 524 | 684 | 2.4E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.