Pseudomonas chlororaphis EA105, NZ35_RS15040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 8 | 93 | 3.0E-15 |
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 143 | 401 | 7.6E-78 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 140 | 396 | 4.1E-75 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 5 | 152 | 1.57E-21 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 161 | 382 | 4.84409E-81 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 147 | 381 | 8.6E-62 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 6 | 124 | 5.1E-13 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 147 | 394 | 1.44E-71 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 141 | 386 | 1.6E-70 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 5 | 133 | 5.7E-25 |
| Coils | Coil | Coil | - | - | 236 | 256 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.