Pseudomonas chlororaphis EA105, NZ35_RS01020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004519 | endonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.90.540.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF06958 | S-type Pyocin | IPR016128 | Pyosin/cloacin translocation domain | 508 | 644 | 1.7E-26 |
| SUPERFAMILY | SSF54060 | His-Me finger endonucleases | IPR044925 | His-Me finger superfamily | 645 | 775 | 9.42E-45 |
| SUPERFAMILY | SSF69369 | Cloacin translocation domain | IPR036302 | Pyosin/cloacin translocation domain superfamily | 457 | 672 | 3.53E-28 |
| Coils | Coil | Coil | - | - | 191 | 235 | - |
| Gene3D | G3DSA:3.90.540.10 | Colicin/pyocin, DNase domain | IPR037146 | Colicin/pyocin, DNase domain superfamily | 645 | 778 | 3.6E-52 |
| CDD | cd00085 | HNHc | IPR003615 | HNH nuclease | 738 | 775 | 7.54333E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.