Strain | Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGTTGCCGCGACGGGTGCAGTTTCTGCTGGGCGAAGCGGATGCGCCGTTTGGCGCCGCCTTCCAGGCGGTCGATGTCGTAGCCGAGGGCGCGCAGGCG GTCGCTGTAGACCAGGTGCTCGCGGCTGTGGTGGCCTTCCTGGCCGATGAAGCCACGGATCTGTTGCTTCAGCGCCGGGTCCTCGACCCGTTCGCGGTAG TGGCGCACGGAGTCGATAAAGAAGCGCTCGCCATCGGGGAACAGCACCGACATGGCGTTGAACATGTGGGTCTTGAAAGCGTCGCCGCTGTGCCAATGGC GCGGCATCGGATCGGGCAGGTCGAAGTCCAGATGACGCGGGCGGATCTCCAGACCTTCGGGGGTGGTGCTGGCCATAGCGGCTCCCTGTGATGGTGAAGG ATCATGGGATCGACTATCGCTTGCGGGGGATAGCCTCACAAGGTTATCTTCTGCCAACTTTCCGGTCATATCCGGCCAGCGGTCAGAACAATAAACAGCC
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DNA Sequence for Gene |
>Q047_03299
ATGAAACAACCGCTCAATTTCACCGCCGAACTGGTGCCGGTGGCCTATGCCGAGGCACTCCTCGATCTTGTCGCGGAGTACGGCGTATCCCGCCAGGCGC TGTTCGACGCTGCGCGGGTGCGTCCCGAGGTGCTGGACAGCCCGAACGGCCGCCTGTCCTTCCTCGACTTCAACCAGCTCACCTACAGCGCCCAGGCCCT GTGCGGCGAGCCGGCGCTGGGGTTGGTGCTCGGCCAGCGCCTGAACGTCTCCGCCCACGGCATCCTCGGCTACGCGGTGCTGTCCAGCGCCAACCTGGGC AAGGCCATCCAGTTCGCCCTCAAGTACTACCGGGTGCTCGGCCTGGCCTACGAACTGGAACTGGTGCTCGATGACGGCCGCGCCGAGTTGCGCGCGGTGG AGTCGATGCCGCTGGGCGCCGCCTCGGTGTTTGCCGCCGAGGGCCTGATGGCGACGCTGTATTCCATCGCCTGCTTCCTGGTCGGCGAGCCGTTGCAGGA CGTGCGGGTCGGCTTCGCCTATCCGCCGCCGGCCCATGCCCGGCGCTACGCCGAGGTGTTCGGGGTGGCCGCGGAGTTCGAGCAGCCCTGGCACTGGCTG AGCATGCCCAGCGAGTACCTGGAACGACCGATGGCGCTGGCCAACCCGGCCACGGTGCAGATGTGCGAGCAGCAGTGCGAGGCGCTGCTGGCCACCCTGG ACGTCCAGGAAGGCCTGCTGACCCGTGTGCGCCGCCTGCTGCTGGCGCGTCCCGGCGACTTCCCCGATCTCGAACAGGCCGCCCGCGAACTGCACACCAG CGGGCGCAGCCTGCGCCGGCACCTGTCGTCGCTGGGCACCACCTACCAGCAGGTCCTCGACGATGTGCGCAAGCGCCTGGCTCTGCAATACCTGACCACC ACCCAGCTACCGCTGTACGAGATCGCCCTATTGCTCGGCTTCAACGATTCGTCGAACTTCCGCCGGGCGTTCCGCAAGTGGACCGGCAAGCTGCCCAGCG ACTACCGCGAAGCGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGACGCCGGCGATCCTCGGCAGCGGATGGATGTGCCATGCTTGGCGTTTCATAGAAATCCATGGCGCGCTTGCCGCGCCGACCGTGATCGGAGTCTTG CATGTCGACATCCCCCGCGCTGATCCGCGAAACCTTTCCCGTCGGGCCCTTGCAGTGCAACTGCACCATCATTGGCGATCCGCTGACCAGGAAGGCCATC GTCGTCGATCCGGGCGGCGACCACGAACTGATCCTGCAGCGCCTCGACCGCCTCGGCCTGCAGCTGGTCAGCATCATCCATACCCACGCGCACCTGGATC ACTTCCTCGCCTCCGGCGAGATGAAGAAGCGCACCGGCGCCAGCCTGCACCTGCACAAGGACGACCAGTTCCTCTGGGACAACCTGGAGATGCAGTGCCA ACTGTTCGGCGTGCCCTACACGCCGGTGCCGGCCCCGGACCGCTGGCTGGCCGACGACGAGGAACTGGCCTGCGGTTGCGGAGTGGCACTGCACACGCCG
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Amino Acid Sequence |
>AraC family transcriptional regulator
MKQPLNFTAELVPVAYAEALLDLVAEYGVSRQALFDAARVRPEVLDSPNGRLSFLDFNQLTYSAQALCGEPALGLVLGQRLNVSAHGILGYAVLSSANLG KAIQFALKYYRVLGLAYELELVLDDGRAELRAVESMPLGAASVFAAEGLMATLYSIACFLVGEPLQDVRVGFAYPPPAHARRYAEVFGVAAEFEQPWHWL SMPSEYLERPMALANPATVQMCEQQCEALLATLDVQEGLLTRVRRLLLARPGDFPDLEQAARELHTSGRSLRRHLSSLGTTYQQVLDDVRKRLALQYLTT TQLPLYEIALLLGFNDSSNFRRAFRKWTGKLPSDYREAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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