Strain | Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGGGTGCCGCGCAGCTCGCCCTTCAACGCCAGCGCGTAGCGTCCGAAGCCTTCCAGTTCGCCGAGGATGCGCAGGGTCTCCTGGTGGAACAGCTCGCCC TTGCTGGTCAGGCTGAAGCCGCCGCGGCCACGGTGGCAGAGCACGATGCCGAGCTGGTTCTCCAGTTGACTCATGTAGGTGCTGATCGCCGAGGTCGACA GGTTCAACTCCTGCTGGGCGGCGGCGAAGCCCTGGTGGCGCACCACCGCGGCGAAGATGCGCAACAGGCGCAGGTCGGGCAAGGCGTTGGACACGGCGAC TCCGGTTTGCGGGCGAGGATTTCGGACTGCGGGCCGAGGCAAAGCCCGCCGTCCAGGCTCGGCGGCGAAGTCTAGCCGCTTCGCCGTTAGTTTAGAAATC TCTGAACTGATTATTTGTAGCCAGCGATTTGACTCGCTACCGGCTGTGAAGAGAATCCATCCGACCCCTAAAACAACCACAACGACCGTGAGGCCACCCC
|
|
DNA Sequence for Gene |
>Q047_02775
GTGGACAAGAATCTCCACCAGCCCCTGGGCGGCAATGAAATGCCCCGCTTCGGCGGCATCGCCACCATGATGCGCCTGCCCCATGTCCAGTCCCCCGCCG AACTCGACGCCCTCGATGCCGCCTTCGTCGGCGTGCCCCTCGACATCGGCACCTCCCTGCGCTCCGGTACCCGCTTCGGCCCCCGCGAGATCCGCGCCGA ATCGGTGATGATCCGTCCCTACAACATGGCCACCGGCGCCGCCCCCTTCGACTCGCTGAACGTGGCGGACATCGGCGACGTCGCGATCAACACCTTCAAC CTGCTGGAAGCCGTGCGCATCATCGAGCAGGAATACGACCGCATCCTCGGTCACGGCATCCTCCCGCTGACCCTCGGCGGCGACCACACCATCACCCTGC CGATCCTCCGCGCGATCAAGAAGAAGCACGGCAAGGTCGGCCTGGTCCACGTCGACGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGC CCACGGCACCACCTTCCGCCGCGCGGTGGAAGAAGACCTGCTGGATTGCGACCGTGTTGTGCAGATCGGCCTGCGCGCCCAGGGCTACACCGCCGAGGAC TTCAACTGGAGCCGCAAGCAGGGCTTCCGCGTGGTGCAGGCCGAGGAGTGCTGGCACAAGTCGCTGGAGCCGCTGATGGCCGAGGTCCGCGAGAAGGTCG GCGGCGGCCCCGTCTACCTGAGCTTCGACATCGACGGCATCGACCCGGCCTGGGCGCCCGGCACCGGCACCCCGGAAATCGGCGGCCTGACCACCATCCA GGCGATGGAAATCATCCGCGGCTGCCAGGGCCTGGACCTGATCGGCTGCGACCTGGTCGAAGTCTCGCCGCCCTACGACACCACCGGCAACACTTCGTTG CTGGGCGCCAACCTGCTCTATGAAATGCTCTGCGTCCTCCCGGGCGTGGTGCGTCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGTAGCGCGACCATGACCGACGACCGCGTCGAACAGGTGCAGGAGGCCGCCCGCCGACTGGTGGCGGCCTTCGCCCGCAACGATGCCGAGGCCTATTT CGCCGCCTTCAGCGAGGACGCCAGCTTCATCTTCCACAACTGGCCTCAGCCGCTGCGCTCGCGCGCGGCCTACCGCAAGTTGTGGGAGCGCTGGCGACGC GAGGACGGCTTCGAAGTGCTGGCGTGCGAATCCAGCAATACCTGCGTCAGCCTGCAAGGCGACCTGGCGATCTTCAGCCACGATGTCGCCACCCGGCTGC GCCTCCAGGGAACGGAAAGCCTGAACCGGGAACGGGAAACCATCCTGTTCCGCCTAGAACAACAAGAAGGCCGTTGGCTGGCCTGCCATGAGCACTTGTC GGCGATGCCGGAGTACCTGCCATCGACTAGCTAGCTCTCCCGGGAGAACGTCATGGATAACAACAATAACCAACACGCAATCACACGCATCGAAACCTTC
|
|
Amino Acid Sequence |
>agmatinase
MDKNLHQPLGGNEMPRFGGIATMMRLPHVQSPAELDALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMATGAAPFDSLNVADIGDVAINTFN LLEAVRIIEQEYDRILGHGILPLTLGGDHTITLPILRAIKKKHGKVGLVHVDAHADVNDHMFGEKIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAED FNWSRKQGFRVVQAEECWHKSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGNTSL LGANLLYEMLCVLPGVVRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|