Strain | Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGACCACGCGCCTGCTCTATGAGTCGAGGCGCAACGGCACGCTCCCGGAGTTCAAGCCGTCCGAGGTGCTGGCGCACATCAACCGCGGCCTGATCAACA CCAAGTTGGGCAAGCACGTGACCATGCTCGGCGGGGTCATCGACCTGGAGAAGAACAGCCTGACCTACAGCATCGGCGGCCACCTGCCGCTTCCTGTGTT GTTCGTCGAAGGGCAGGCGAGCTACCTGGAGGGCCGTGGCCTGCCGGTGGGCCTGTTCGACGATGCGACCTATGACGACCGGGTCATGGAGTTGCCGCCT TCCTTCAGCCTGTCGCTGTTTTCCGATGGCATCCTCGATGTGCTGCCAGGAGCTACGCTGAAGGAGAAAGAGGCTTCGCTACCGGAACAGGTGGCAGCCG CCGGAGGCACCCTCGACGGGCTGCGCCAGGTCTTCGGGCTGGCCAACCTGGCGGAGATGCCGGATGATATCGCCTTGCTGGTGTTGAGCAGGAACCTTGC
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DNA Sequence for Gene |
>Q047_01514
ATGAGTACCGGTAAAATCCAGTTTGCCGAACAGAACGGCTCCTTCGTTCTGAAATTCGTCGGTGAGGTCCGCCTCACCCTGTGCTCGGCCCTGGATTCCA CCATCGAAAAGATCTTCGCTGCGCTGAATTTTTCGGCGATCATCATCGATCTTACGGAAACCCAGAGCATCGATAGCACCACGCTCGGCCTGCTGGCCAA GCTGTCCATCCTGTCGCGGCAGAAAATCGGTCTGTTGCCCACGCTGGTGACCACCAATCCGGACATTACCCGTCTGTTGCAGTCGATGGGCTTCGATCAG GTGTTCAATATCGTCGATCGTCCGATTCCGTGCCCGGAATGCCTGTCCGACCTGCCGCCGCAGGACCAGTCGGAAGATGTGGTGCGCGACAAGGTTCTGG AGGCGCACCGCATCCTGATGGGCCTCAACGAATCCAACCGCGAAGCCTTCCACGACCTGGTCAGCGCCCTGGAGCGCCATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGTCGATCCCTTCCCGAATTCCTGCTGAATCCTCCGCTGCGCCGGAACGGGACGCCCTGCATGCGCGTCCCGCCGGCAGCGGCGATCAGTGGCGGGTC GCCAACTGGTATTCGAGCTTTTCCTGGTCGCGTGCGAACAGGCGGATGCCTTCGGCGAGCTTTTCGGTGGCCATGGCGTCCTCGTTCATCTGCCAACGGA AAGCGCTCTCGTCGAGCACCTGGCGCGGCTCGCCTTCGCCCGGCAGCAGCAGGCGCGGCAGCTCGCCCTGAGCGTCAGCCAGTTGTTGCAGCAGGTCGGG ACTGATGGTCAGGCGGTCGCAGCCGGCCAGTTGCTCGATCTGGCCGAGATTGCGGAAGCTGGCGCCCATCACCACCGTCTTGTAGCCGTTGGCCTTGTAG TAGCGATAGATGCGCGAGACCGACTGCACGCCGGGATCCTCGGCGCCGGCGTAGTCGCGGTTCTCGCTCTTCTTGTACCAGTCGTAGATGCGCCCGACGA
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Amino Acid Sequence |
>anti-anti-sigma factor
MSTGKIQFAEQNGSFVLKFVGEVRLTLCSALDSTIEKIFAALNFSAIIIDLTETQSIDSTTLGLLAKLSILSRQKIGLLPTLVTTNPDITRLLQSMGFDQ VFNIVDRPIPCPECLSDLPPQDQSEDVVRDKVLEAHRILMGLNESNREAFHDLVSALERH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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