Strain | Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCTTCCCGCGGACCATCCCGCAGGCCGAAGCGCTGAAGGACGCCGGCGTGACCATCGACCACGTGGTCGAGATCGCCGTCGACGACGAGGAGATCGTG TCGCGTATCGCCGGTCGTCGCGTGCATCCGGCCTCCGGCCGCGTGTACCACACCGAGCACAACCCGCCGAAGGTCGCCGGCAAGGACGACGTTACCGGCG AAGAGCTGATCCAGCGCGAGGACGACAAGGAAGAGACCGTGCGTCACCGCCTGTCGGTCTACCATTCGCAGACCAAGCCGCTGGTCGACTTCTACCAGAA GCTGTCGGCCGCCGAAGGCACCCCGAAATACCACAGCATCGCCGGCGTCGGCTCGGTCGAGCAGATCACCGCGAAAGTGCTTTCGGCCCTGAGCTGATCC GCAGTGCTGTAGCACCGACGGCCCGCTTGCGGGCCGTCGGCGTTTCCGGGGCGGAGAAGGCTGGTACAATCGGCGTCTTTTTCACCACGCGGAACCGTCG
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DNA Sequence for Gene |
>Q047_00615
ATGTCCACTCTGTTGGCCCTGGATACCTCCACCGAAGCCTGCTCCGTCGCCCTGCTCCACGAGGGGCGGGCGCTCAGTCACTACGAGGTGATCCCGCGCC TGCACGCCCAGCGCCTGCTGCCGATGGTCCGCGACCTGCTCGACGAGGCCGGCGTCGCTCTGTCCGCGGTGGACGCCATCGCTTTCGGGCGCGGTCCGGG CGCCTTCACCGGCGTGCGCATCGCCATCGGCGTGGTCCAGGGTCTGGCCTTCGCCCTGCAGCGCCCGGTACTGGCGGTCTCCGACCTGGCGATCCTGGCC CAGCGGGCCTACCGCGAGCAGGGTGCGGAGCGGGTCGCCGCGGCCATCGACGCGCGGATGGACGAGGTCTACTGGGGTTGCTACCAGTTGCAACAGGGCG AGATGCGCCTGGCCGGCAGCGAAGCGGTACTGCCGCCCGAGCGGGTCGCCGTACCGTGGGACGCCGCAGCCGCGGATTGGTTCGGCGCCGGCACCGGCTG GGGCTACGTCGAGCGCATGCCGCAGCGCCCGGCCGCGCTGGACGCGAGCCTGCTGCCGCATGCCGAGGACTTGCTCAGCCTGGCCGGCTTCGCCTGGGCG CGCGGCGAAGGCGTGGAGGCGGAACAGGCGCTGCCGGTGTACCTGCGCGACAACGTGGCGACGCCGAAAAAAACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAATGCCGCGCAGCGGTAATTGCCAAGCCTTTCGGGGCTGGCTAGAGTGTGGAGACTTCCCCGGGTTTTGATCATGCGTATCGACGGACTTTCTTCCTCT TCGTTGCCGCTGGAGCGCAGCGCCCGACCGGGCTCCGCGGTCACGCCGTATCGCGACGTGCAGCGCGAGGTCGAGGCGCGGCGCGAGCAGCCGGCGCCGG TTTCCGGCAGCCAGGGCTTCGAGCAGGCGCCGCAGGCGCGCAAGGTCCAGGCCAGTTCGGCGGGCGGCGACAGCCTGCCGGTCAGCGCCCGCGACCTGCT GGCGTTCCAGCGCCCGGTAAGCAGCCATGCGGCGATGGCCCTGGCCAGCTACAACTCCACCGCCAGCCTCAACATCGACGCCGGCGCCGAGGATGTCCTC GGCCTCGACCTCTACGCCTGAGCGGTTCCCTGCGCTGCCGTGGTTTCCCTTCCTTATTTCCTCGGTTGTCCATCCTGGAACGAGGCGGCCTGGCGCGGCA
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Amino Acid Sequence |
>putative protease with chaperone activity
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILA QRAYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPAALDASLLPHAEDLLSLAGFAWA RGEGVEAEQALPVYLRDNVATPKKTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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