Strain | Pseudomonas aeruginosa BWHPSA039 adkgf-supercont1.2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGAAGCGGCACACGGTGAACTCCGAGTTCGACATCAAGCAGATCTCCGCGCTGGCTCCGGTGGAAATCGCCTACAGCTACGGCAACGTCAGCGACACCG CCTACAAGGCCCTGGCCCAGGCCGGCGCCAAGGCGATCATCCATGCCGGCACCGGCAACGGCTCGGTGCCCGCGCGCGTGGTGCCGACCCTGCAGGAACT GCGCAAGCAGGGCGTGCAGATCATCCGCTCCTCGCACGTCAATGCCGGCGGCTTCGTCCTGCGCAACGCCGAGCAGCCGGACGACAAGAACGACTGGATC GTCGCCCACGACCTGAACCCGCAGAAGGCGCGCATCCTGGCCGCGGTCGCGATGACCAAGACCCAGGACAGCAAGGAGCTGCAACGGATCTTCTGGGAAT ACTGAGTGAACCCTTCCGGCGCCGCCTGCCGGCCGTGCCGGAAAACCGCCCGCTCCGCCGCCCATCGTGGCGGCGGGCTGGCCTAGCCGCGACGACTGTG
|
|
DNA Sequence for Gene |
>Q044_03848
ATGGAATCCCCCGACCCGCCCTGCAGCGTACCTCCGTCACTGACCGTGAAGCCCCGCCTCGTCCGCCAGTTGCTGCTCCCCATTCCCCTGCTCCTGCTGA TGCTCGGCTTCGGCTACGGCGGCTACCGGATCAGCGAGAGCGCCGGCATCCGTGCCCTCGCCGAGAATGGCGAACGCCAGCTGGAGCTGCATGCGCGGAC GGTCGAGAGCGAGATCAGCAAGTACACCTACCTGCCCAGCCTGCTGGAGCTAGAGCGCAGCGTCAGCCACCTGCTCACCGACCCGACGCCATACCGGCGC AACCAGGTCAACGCCTACCTCGAAGGCCTCAACCGCCGCGCCGGCAGCCGCGCGGTGTACCTGCTGGACACCAACGGCCGGGTCCTGGCCACCAGCAACT GGAGCGACCCGGACAGCTACCTCGGCGAGGACCTGTCGTTCCGCGCCTACTGGCAGGACGCGATGAAGGGCAAGCCGGGCCGCTTCTACGGCATCGGCAG CACCCGCGGCGAGCCGGGCTACTACCTGGCCCACGGCCTGGTCCACGGCGGCCGGATCATCGGCGTGGCGGTGGTCAAGGTGAAGATGGACGCCCTCGAG GAGCGCTGGGAGAAGGCGCGCCTGGAAGCCTTCGTCAGCGACGAGAACGGCATCATCATCCTCTCCAGCAACCCTGCCCTGCGCCTGAAGGCGGTGCGCT CCCTGAGCGCCGACGACAAGGAGCGCCTGGCGCGCAGCATGCAGTACTACTGGTGGGCGCTGAACGAGTGGCAGCCGCTGCTGCGCGAGCCGCTGGCCGC CGGAGTGGAGAAGCTCAGTTTCCCCGCCGATGAGCAGCACCCGCGCGGCGAAGCGGTCACCTACCTGGCGCAGACCCGCGCGCTGAATGACACGCCGTGG AACCTGACCCTGCTCAGCCCGCTGGAAGACCTGCGCCGCGACGCGGTGCGCAATGGCATGCTGGCCGCCATCGGTTTCGCCCTCCTGGCCTTCCTGCTGA TCGCCTGGAACGAGCGGCGCAAGGTACTCGCCACCCGCCTCGCCGCGCGCGAGGCGCTGCAACGGGCCAACGGCGAGCTGGAAGTGAAGATCGCCGAACG CACCGCCGACCTGCAGGCCAGCAACGCACGCCTGACCGCCGAGATCCACGAGCGCCAGCAGGCCGAGGACACCCTGCGCAAGGCCCAGGACGAACTGGTC CAGGCCGGCAAGCTGGCGGTGATCGGGCAGATGTCCACCAGCATCGCCCACGAACTCAACCAACCACTGGCGGCGCTGCGTACGCTGTCCGGCAACACCG TGCGCTTCCTCCAGCGCGGCAAACTGGAGACCGCCAGCACCAACCTCGCCACCATCAACGAACTGGTCGACCGCATGGGCCGCATCACCGCCAGCCTGCG TGCCTTCGCCCGGCGCAGCGACGACGCCGGCCAGGCCAGCCTGGCCAAGGCGGTGGACGCGGCGCTGCTGATCCTGCACGGGCGCCTGGAGCAGGACCCG CCGACCCTGCACCGGCATTTCGACGACGTGCGCCTGGGCATCGACCAGACCCGCCTGGAGCAGATCCTGGTCAACCTGCTGGCCAACGCCCTCGACGCCA TGAGCGGGCAGGCCGACCGCCAGCTCTGGCTGGAAGGCCGGCGCGAGGAGGAGCGCTACGTCCTGCGCGTGCGCGACAACGGCCCCGGTATCCCGCCGGC GGCGCGCGTCCACCTGTTCGAACCCTTCTTCACCACCAAGCCCGGCGAACATGGCCTGGGCCTCGGCCTGACCCTCTCGGCCAGCCTGGCCACCGCCGCC GGCGGCAGCCTCAGCGTGCAGCACCCCGAAAGCGGCGGAACCGCCTTCGAGCTGAGCCTGTCCCTGGTTCCCGATTCCCCGACTGCGAGTCCCGCCCGAT GA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACGAGCCGCTTTCCGTCCTGATCGTCGAAGACGATCCGCATGTCTTGCTCGGCTGCCAGCAGGCGCTGGAGCTGGAGGACATCCCCTGCATCGGCGTCGG CAGCGCCGAGGAGGCGCTGCAACGGGTCGACCGCGACTTCGCCGGCATCGTCGTCAGCGACATCCGCCTGCCCGGCATCGACGGCCTGACCCTGCTGGAG CGTCTCAAGGCCCTCGACCCGAGCCTGCCGGTGGTGCTGATCACCGGTCACGGCGACATCTCCATGGCAGTACAGGCGATGCACGCCGGCGCCTACGACT TCATGGAGAAGCCCTTCTCTCCGGAACGCCTGGTCGAGGTCGCCCGCCGCGCCCTGGAGCAGCGCGGGCTGGCCCGCGAGGTCAGCGCGCTGCGTCGCCA GTTGGCCGGCCGCCAGGACCTGGCGCAACGGATCATCGGCCGCTCGCCGGCGATCCAGGCGTTGCGCGAGCTGATCGCCAACGTCGGCGACACCTCGGCC
|
|
Amino Acid Sequence |
>sensor histidine kinase
MESPDPPCSVPPSLTVKPRLVRQLLLPIPLLLLMLGFGYGGYRISESAGIRALAENGERQLELHARTVESEISKYTYLPSLLELERSVSHLLTDPTPYRR NQVNAYLEGLNRRAGSRAVYLLDTNGRVLATSNWSDPDSYLGEDLSFRAYWQDAMKGKPGRFYGIGSTRGEPGYYLAHGLVHGGRIIGVAVVKVKMDALE ERWEKARLEAFVSDENGIIILSSNPALRLKAVRSLSADDKERLARSMQYYWWALNEWQPLLREPLAAGVEKLSFPADEQHPRGEAVTYLAQTRALNDTPW NLTLLSPLEDLRRDAVRNGMLAAIGFALLAFLLIAWNERRKVLATRLAAREALQRANGELEVKIAERTADLQASNARLTAEIHERQQAEDTLRKAQDELV QAGKLAVIGQMSTSIAHELNQPLAALRTLSGNTVRFLQRGKLETASTNLATINELVDRMGRITASLRAFARRSDDAGQASLAKAVDAALLILHGRLEQDP PTLHRHFDDVRLGIDQTRLEQILVNLLANALDAMSGQADRQLWLEGRREEERYVLRVRDNGPGIPPAARVHLFEPFFTTKPGEHGLGLGLTLSASLATAA GGSLSVQHPESGGTAFELSLSLVPDSPTASPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|