Pseudomonas aeruginosa PAO1-GFP, V563_03198
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-GFP adTym-supercont1.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCTGCGAAGTGTCCTATAAGGACCGTGGCGGCAAATACCAGGGCCAGCGCGGCGTGACCCTGCCAAAAGCCTGACGCCAGAGCGTTTCGACACCGGA AACCGGGCCTGGCGCCCGGTTTTTTCATGCCTTTTCCGCCAACCCCTCGCTGTTCCCCGCCGGCCGCTCTGGCACGCCTTATCGCGGGCGGGCAGGGGCT TATGCGCAGGCGGCCGCCCGTCCTGTGAAATCTGGCAGTTACCGTTAGCTTTCGAATTGGCTAAAAAGTGTTCATCGGCTACGCGTGAACACGGACGCCA ATCGTTTGCGCAGGCCGATCTGCAAGACCCACACAAGCCCCTCGCCTGAAGGGGTACGCATCCGCCGTGGCTGGTCCGCGCGGATGGCCGCTGAGTTACT TGTCTGCCGTTCGAACAATAAGAACGAACTCTACGTAATGCCGGGATACCCGTGGCAGCGATAGCTGTTTGCCTGTTCGAAAATTTTTGGGAGGTGTGAA
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| DNA Sequence for Gene |
>V563_03198
ATGCGGCGCGAAAGTCTGTTGGTATCGGTTTGCAAGGGCCTGCGGGTACATGTCGAGCGCGTTGGGCAGGATCCCGGGCGCAGCACGGTGATGCTGGTCA ACGGCGCGATGGCGACCACCGCCTCGTTCGCCCGGACCTGCAAGTGCCTGGCCGAACATTTCAACGTGGTGCTGTTCGACCTGCCCTTCGCCGGGCAGTC GCGTCAGCACAACCCGCAGCGCGGGTTGATCACCAAGGACGACGAGGTGGAAATCCTCCTGGCGCTGATCGAGCGCTTCGAGGTCAATCACCTGGTCTCC GCGTCCTGGGGCGGTATCTCCACGCTGCTGGCGCTGTCGCGCAATCCGCGCGGCATCCGCAGCTCGGTGGTGATGGCATTCGCCCCTGGACTGAACCAGG CGATGCTCGACTACGTCGGGCGGGCGCAGGCGCTGATCGAGCTGGACGACAAGTCGGCGATCGGCCATCTGCTCAACGAGACCGTCGGCAAATACCTGCC GCAGCGCCTGAAAGCCAGCAACCATCAGCACATGGCTTCGCTGGCCACCGGCGAATACGAGCAGGCGCGCTTTCACATCGACCAGGTGCTGGCGCTCAAC GATCGGGGCTACTTGGCTTGCCTGGAGCGGATCCAGAGCCACGTGCATTTCATCAACGGCAGCTGGGACGAATACACCACCGCCGAGGACGCCCGCCAGT TCCGCGACTACCTGCCGCACTGCAGTTTCTCGCGGGTGGAGGGCACCGGGCATTTCCTCGACCTGGAGTCCAAGCTGGCAGCGGTACGCGTGCACCGCGC CCTGCTCGAGCACCTGCTGAAGCAACCGGAGCCGCAGCGGGCGGAACGCGCGGCGGGATTCCACGAGATGGCCATCGGCTACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCTTGACCTGCGAAGACCCGGCCTGGCCGGGCTTTGCGGTTGCATAACGCACGGAGTAGCCCCATGCACGCCATCCTCATCGCCATCGGCTCGGCCGG CGACGTATTTCCCTTCATCGGCCTGGCCCGGACCCTGAAACTGCGCGGGCACCGCGTGAGCCTCTGCACCATCCCGGTGTTTCGCGACGCGGTGGAGCAG CACGGCATCGCGTTCGTCCCGCTGAGCGACGAACTGACCTACCGCCGGACCATGGGCGATCCGCGCCTGTGGGACCCCAAGACGTCCTTCGGCGTGCTCT GGCAAGCCATCGCCGGGATGATCGAGCCGGTCTACGAGTACGTCTCGGCGCAGCGCCATGACGACATCGTGGTGGTCGGCTCGCTATGGGCGCTGGGCGC ACGCATCGCTCACGAGAAGTACGGGATTCCCTACCTGTCCGCGCAGGTCTCGCCATCGACCCTGTTGTCGGCGCACCTGCCGCCGGTACACCCCAAGTTC
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| Amino Acid Sequence |
>rhamnosyltransferase
MRRESLLVSVCKGLRVHVERVGQDPGRSTVMLVNGAMATTASFARTCKCLAEHFNVVLFDLPFAGQSRQHNPQRGLITKDDEVEILLALIERFEVNHLVS ASWGGISTLLALSRNPRGIRSSVVMAFAPGLNQAMLDYVGRAQALIELDDKSAIGHLLNETVGKYLPQRLKASNHQHMASLATGEYEQARFHIDQVLALN DRGYLACLERIQSHVHFINGSWDEYTTAEDARQFRDYLPHCSFSRVEGTGHFLDLESKLAAVRVHRALLEHLLKQPEPQRAERAAGFHEMAIGYA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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