Pseudomonas aeruginosa BWH060, V561_05198

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa BWH060
GCF_000629385.1|latest
Locus Tag
V561_05198
Name
Replicon adTvY-supercont1.4
Genomic location 186587 - 189634 (+ strand)

Cross-References

RefSeq WP_003083874.1
GI 489174340
NCBI Locus Tag V561_05198

Product

Feature Type CDS
Coding Frame 1
Product Name
ACR family transporter
Synonyms
Evidence for Translation
Charge (pH 7) -8.33
Kyte-Doolittle Hydrophobicity Value 0.185
Molecular Weight (kDa) 111.9
Isoelectric Point (pI) 5.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
TriC TriC is a resistance nodulation cell division (RND) transporter that is a part of TriABC-OpmH, a triclosan-specific efflux protein. [PMID:17720796] ARO:3003681 protein homolog model Strict 1937.2 99.9 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6VEJ TRANSPORT PROTEIN 01/02/20 TriABC transporter from Pseudomonas aeruginosa Pseudomonas aeruginosa 4.5 ELECTRON MICROSCOPY 99.9

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000156 (999 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: V561_05198

Human Homologs

References

No references are associated with this feature.