Pseudomonas sp. BRG-100, JH25_RS12310
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. BRG-100
GCF_000737955.1|latest |
| Locus Tag |
JH25_RS12310
|
| NCBI Old Locus Tag | JH25_15135 |
| Name |
Synonym: JH25_15135 |
| Replicon | scaffold00001 |
| Genomic location | 3423544 - 3424053 (+ strand) |
Cross-References
| RefSeq | WP_005792508.1 |
| GI | 492259377 |
| NCBI Locus Tag | JH25_RS12310 |
| NCBI Old Locus Tag | JH25_15135 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.56 |
| Kyte-Doolittle Hydrophobicity Value | -0.001 |
| Molecular Weight (kDa) | 18.1 |
| Isoelectric Point (pI) | 5.74 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000079 (812 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: JH25_RS12310
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.