Pseudomonas sp. FH4, H097_RS18200 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. FH4 scf_29086_15.1_contig_1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATGGAAGTCAATTTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGGCCCAGCGAAGCCATTGTGGTCTCCACTTTCCATAT CGAACTCGATGGCGGGGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAACCGGTGCGCGAGATGCTCGATGCGGGCTTCCAGTCCGACCTC GACGACCAGGACGAACGCTGGGTCAAGGCCCTGCGCGAAGACCTGCTGGATGTCGATGTGCCGCTGAGCGCCACCGTGGCGCGTCGCCAGTTGCGCCTGC GGGACATTTTGCATATGCAGCCGGGGGATGTGATCCCTGTCGAGTTGCCAGACGAATTGATCATGCGCGCCAACGGCGTGCCGTCGTTCAAGGTCAAGCT CGGTTCCCACAAAGGCAACCTGGCGTTGCAAGTGGTCGAGCCGATCAACCGTCGCTGATTCCCCTCTAACTCCTGTTTTTTGCTGCGCCGAGGACATGTA
DNA Sequence for Gene
>H097_RS18200 |fliN
ATGGCTACCGAACACGAAAACACTTCCGCCGAAGACCAGGCCCTGGCCGATGAATGGGCCGCTGCCCTGGAAGAAACCGGCGATGTAGGCCAGGACGATA TCGACGCTTTGCTGGCGGCCGATGCTGCCACTGCACCGGTGGGCAACCGCTTGCCCATGGAAGAGTTCGGCAGCGTGCCGAAGAACCATGAGCCGGTATC GCTCGATGGTCCGAACCTGGACGTGATCCTCGATATCCCGGTATCGATCTCCATGGAAGTGGGCAGCACTGAAATCAACATCCGCAACCTGCTGCAACTC AACCAGGGTTCGGTGATCGAGCTTGACCGCCTGGCCGGCGAGCCGCTGGATGTGTTGGTCAACGGCACGCTGATCGCCCATGGCGAAGTGGTGGTGGTCA ACGAAAAGTTCGGCATCCGCCTGACTGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATGAGTCGCTGGGTGGTGGGACTGTTGTGGGCGCTGCCACTGGGCGCATTCGCGGCTGAGCCGGTGGCCTTGGCCGCTGCACCGGCCGTCGGTGGCAAT GTGGCCGGGCAACTGACTCAGTTGGTGCTCGGCCTGCTGCTGGTGGTGGGGTTGATCTTCGTCCTCGCCTGGCTGTTGCGCCGGGTGCAGCGGATCGGCC CGGGCAATGCCCAGGTCATCGAGCTGGTGGGTTCGCGGGCCTTGGGCGCGCGGGATCGCCTGGTGCTGGTGCAGGTGGGCGAAGAGCAGATCCTGCTCGG CCTGACGCCTGGTCGTATTACCCCGCTGCACGTGCTCAAGCATCCGGTGAGCGTGGGCCAGACCGAGGCCGCCACCCCGGAGTTCGCCCAGCGCCTGATG GAGCTGATGGGCAAGGACCAGAAGGATAAGAAGTAATGCGCGTTCTATTGGCGCTCATGCTGTTGCTGGCCGCGCCCTTGGCGTTCGGCGCCGACCCGTT
Amino Acid Sequence
>flagellar motor switch protein
MATEHENTSAEDQALADEWAAALEETGDVGQDDIDALLAADAATAPVGNRLPMEEFGSVPKNHEPVSLDGPNLDVILDIPVSISMEVGSTEINIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site