Pseudomonas sp. PH1b, U873_RS0114550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCCGGGGCAGCCTCTCGGAGCCGCTGCGGGGATTTCCCGGATCGGTAGACGGATCAGGGTGAGCCGGTCCGTTGCTGCCGGTTCCCCTAGGGTATGGC GTAGATCTTGAACAACTGCCCGGGGTATTGCCGCCAGGTCTGCGCGGCGCTGCAGCAGGTTCGGCCCCCTGCCCCCTGTTGTCCGCAGGGCGGGCAAAAA ATCAAACCTTTGCCTGGACCGGGGTTCCATCGTCAGGCGCCCCCCAGCGTCGCCCCTACTTCGAACAGGCCATTGTCCGGGCCTTGCTCAATCGCTGAGC GCTCCTGCGTCCCGGGCGGGTGATGTGCCGAACCGCGCCTTCTCCCGCCAATGGCCGGTGATTCTTATCGGCCACGCCTGCGACGGCCAGCGCGGCCGAC ACAGGCCAGGCAAGCAGATTGAACTCCGCCCTCCCCGGACTTTCCCAAGCAATAGAAGCCGGTTCGCCCAACGCTAGACAACGCTCTCTGGAGTATCTCA
DNA Sequence for Gene
>U873_RS0114550
ATGGCCCAGCCCCTCGATGAGCACCCGCACCCGCACCCACACGACGTCGACGCCACGCCGCAGCCCGCCAGCAAGTCGCTTCGCGGTGGCCCGGCAAAGG CATTGCAGTACTGCATCCAGCGGCATGACGCGAGCCACCTGCACTATGACTTTCGCCTGGAGCTGGACGGTGCCCTGAAGAGCTGGGCGATTCCCAAGGG GCCGTCCCTGGACCCCAGGGTCCGGCGTCTGGCAGTGCATGTCGAGGATCATTCGCTGGACTACGTCGATTTCGAAGGGCGCATCCCCGAAGGTCATTAC GGCGCGGGCGAGGTGATTGTCTGGGACCGTGGGGTCTGGATTCCCGAGGGCGACTCGCATCAGGGGTATGCCAACGGCAGGCTGCGCTTTCGCCTGCAAG GGGCAAAGCTTCTGGGCAACTGGAGCTTGTTCCGGACCCGCATGGCCGGCAACCGGGAGCAGTGGCTGCTGGTCAAGTCTGCCGATCCCCAGGCCCGCCA GCAGGAAGACTACGACATTCTGCAGGCGCGCCCCCACAGCGTGCTCAGCGAGCGCACCTGGCTGGCGCCCAATAGCCAGTCGTCCAGACCGCAGTCCAGG AGCGTCGGCCGATGGAACCTGGTCGGCCCGCTCTGGGCCCGGCTCGTGCGGCAGTGGTACCTGGTGGCCCTGAACCTGCGCCGCTTGCAAAAAAGCACCG CGAATGAGCAGAAGCCGATCTTGGAGTTGCCCCGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCAGCCACCCTGTCCTTCCTCCAGATTTTCGCCCAGCGGCCCCAGGGCCTGGACCTGGACCCGCAATTGCAGCGCTGTCTTGATCAGTGCAGGGCCTG CGGCCTCGATCAACTGCCCCTGCCCGGCCAGGGCCATACCCTGCAGCGCTGGCGGGTATTGGCCGAGGTCGCCGGTGCCGACCTGGCGCTGGCCAAGCTG TTCGAAGGCCATACCGATGCCCTGGCCATCATCGATGAGTGCGCTGCCAGCCATCTGGACATCACCGGCAGTTGGGGCGTCTGGGCAGCCGAGCCGCCCA GCGCACGAGTGCGCATCGTCGCCCGCGACGGTCACCAGGTGCGCCTGCAAGGGCGCAAGGCCTGGTGCTCGGGGGCGCTGCAGCTCGATTGTGCCCTGGT CACCGCCTGGGATGAGCAACAGTGCCCACAGTTGGTTGCGGTCAGGCTGGACCAGCCTTCCCTGCGCACTTTTGAGCAAGGCTGGCAGGCCGTGGGCATG
Amino Acid Sequence
>hypothetical protein
MAQPLDEHPHPHPHDVDATPQPASKSLRGGPAKALQYCIQRHDASHLHYDFRLELDGALKSWAIPKGPSLDPRVRRLAVHVEDHSLDYVDFEGRIPEGHY GAGEVIVWDRGVWIPEGDSHQGYANGRLRFRLQGAKLLGNWSLFRTRMAGNREQWLLVKSADPQARQQEDYDILQARPHSVLSERTWLAPNSQSSRPQSR SVGRWNLVGPLWARLVRQWYLVALNLRRLQKSTANEQKPILELPR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site