Pseudomonas sp. PH1b, U873_RS0110940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGAGCGGTGTGCGGCCCAGGTGCTGGCAGCGGGGCACTTTCCGGTGCTGGGGGAATGGGTGGCGCTGCCCATGACCCGCCTGGCAGGCTCGCTCGAAGTC GGCGATGCGGTGTACAACGCGCAGTTCCATGCCTACGCCGAGCGCCTGCTGGAGCGCTGCGACGCGGTGCTGCGCATCGGCGGGCCGTCGGCGGGCGCCG ATGCCATGGTCAGCATCGGTGAGCGCCTGGGCCTGGGGATCTATCAGCAGGTTGGACAATTGCCGGTGATTGTCCCGCAGGCGCAACAGGCCTGATCCCC GGCCATGGCCCTGGCCGGGGCTGGATCCGCTGCCGGCGCTTGAGGGCCGGGCCCTGGCCCTGAGCGCCCGGTTCCGGGCGTTTCTTCACGCTTGGCGGGA AAATACTGTCTATCGTCAATAGGCAAGCGGGAGCTTCGTCAAAGGCCCGGCGCGGTCTGAACCATGCCGGTCGGTTTGTCGCCATGGCGCCTGGAGCATT
DNA Sequence for Gene
>U873_RS0110940
ATGGAAAATCTCGGTCTTGATCCTTCTTCAGGTCGCAGCACCTCCAACCGGGCGCTGACTCGAGCCACCTTGCTCGGATGCTCGGGCCTGCTGCTGGCGC TGTTTCTGTTTACCGGCGTGCTGCTGGTGTATATCGCCTTCGATCAGAACCTCGCTGCCGAGCGGCACAACCGCCTGGACATCGACAAGGCCCTGCAGAC CTTCGACACCAATGCCCGTACCACCCTCAAGGACTACGCCCTGTGGGGCGACGCCTACCAGTACCTGCACCTGAGCGTCGACCTCGACTGGGCCTACACC CGGCAGAACTTCGGCCCCACCCTGTACCGCGAACTGGGGTTCGACGGGGTGTTCGTGGTCAACCCCAGAGGACACACCGTCTACTCGCTGGTGGCCGGGC GCCTGGAGTCGATGGATGCCGGCCAGTGGCTGGGGGATCAGTTGGCGCCCCTGGTGGAGGAGGCCCGGCGCACGGCCGGCGGCCAGGCCAGCCAGCGCTA CCTGTCGATCGCCGGCACCCCGGCGCTGGCAGTGGCCGACATCTTGAGCCCGGGCAACGACCCGCAAGTGCGGCCCGATGCCGGACCGCAGTCGGTGCTG ATCTTTGTCGCCCGGCTGGACCCGGCACGCCTGCTGGCCCTGGGGCAGGGCATGGGCATCGAGCAGTTGCAAGTGGCCCCGGGCGCACCGGCCGACGGCC TGCCAACCCTGGCCTTGCCCGACGGGGCCGGCACCCTGCAGTGGCGGCCGGCGCGCCCGGGGCACCAGCTGCTGGTGTTGGTGATGCCACTGTTGCTGCT GGCCGGCCTGCTGGTGGGGCTGATGGCCCTGTTCCTGCTGCGCCGGGCCGGTGCCGCGGCCCAGGTCATGGATCAGCAGGTCGAGGCCTTGCGCGCCAGC CGCTCGGCCCTGGCCGCCAGCGAGGAGCGCTTTCGCGATGTCGCCGAGGCAGCCTCCGACTGGATCTGGGAGGTCGATCCGCAGTTGCGCTTCACCTACC TGTCGGAGCGTTTCGAGGCGGTCACCGGTCTGGCGCGAGAGGCCGCCCTGGGCAGCCCGATGAATGACCTGCTCAAACCCGAGCAAGGCTCGTTGCGCAC CTGGCTGGCGGCGCCGGAACGCCGCTCCCAGGCGATCCTGCAGTGCGCCTACGAGGACGGCCAGGGGCAACCGCGGGTCTGCCGCCTCTCGGTCCGGGCC ATGGCCGTCGGCGGCTACCGTGGCACCGCCAGCGACATCACCGAAGAAGTCGCCGCTCGACGGCGCATCGAGTACCTGTCCCAGCACGATGCCCTGACCG GGCTGGCCAACCGCACCCGGATGCAGGAGTTCCTCGAAGGCAAGCTGCTGACGCCACCGACGTTGCAGGAACCGCTGTTGATGCTCAGCGTCGATCTCGA CCGCTTCAAGCCGGTCAACGACCTGCTGGGCCACGCGGCCGGCGACCAGGTGCTGCACGAAGTATCCCAGCGTCTGTCCCAGTGCCTGCGCAGCAAGGAC CTGGTGGCCCGGGTCGGTGGCGACGAATTCGTCCTGGTGGTGCCGGGGCAGGTGACCGCGCCTGAAATAGAGGGCCTGTGCCGGCGCCTGATCGAGCGCA TCGAAGAGCCGTTCTACATTGCCGAACACGAAGTCTTCATCAGTGCCAGCATCGGCATTGCCAGGGCCCCGACCGATGCCGTTCTGGCCGAAGAACTGCT GCGCTTCGCCGATATCGCCCTGTACGAGGCCAAGGCCGCGGGCCGCAGCACCTGGCGTTTCTATGCCGCCGACATGAATGTGCGGATCATCGAGCGACGG CGCCTGGAGCGTGACCTGCGCCATGCCATCGAGCAGGACCAACTGCTCCTGCAGTTTCTGCCGCGCTACCGCCTGGGCGACGGGCAACTGGTGGGGGCCG AGGCCCTGGTGCGCTGGCAGCACCCCCAGCATGGGTTGCTGGGGCCGGAGGTGTTTGGGCCGCTGGCCGAGGACACCGGCCTGATCCTGCCGCTGAGCAA CTGGGTGCTGCACGCTGCCTGTCGCGCCGCGCGGACCTGGCCCGAGCGCCTGCTGGTGGCGGTCAACCTGTCGCCCACCGAGTTCCAGCGTGGGCAACTG GTGGCCCAGGTCAGAACGGTCCTCGGCCAGAGCGGCATCGACCCTTCACGGCTGGAACTGGACATGACCGACAAGGCGCTGCTGGACAACAGCCAGCAGG TGCTTGGCATCATGCAGGGGCTCAAGGCCCTGGGGGTGCGCCTGCTGCTGGACGACTTCGGCACCGGCCATTCGGCGTTGCAGTACCTGCAGACCTTTCC CCTGGACGGCTTGAAGATCGACAGCAGCTTCGTCGCCGGACTGAGCCAGGATGAAACGGCTCGCTCCATTGTCGAGGCGATCATCGACCTGGGGCATGCC CTGTCGTTGCGGGTGATTGCCGAAGGGGTGGAAACCCCGGAACAGCTCAAGGTGCTGCGCGACATCCGCTGCGACGAAGCCCAGGGGCCGCACCTGAGCC CGCCCCTGGACAGCGCAGCCCTGCTGGCGCTGTGCGATGCTGGCGCCCGGGCCTCGCGCTCGATCCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGGGGCCTCAGGGCAGGTGGTCGGCGGCAAAGTCGGCTTCAGAACGGGCCTGCAGCCGGCCCTGGCGGCAGGCCTGCTGGAAGCGCTCGAAATCCCGC TCGTTCTGCGTGGCATAGGCCTGGGCGTAGTGCCACAGGGCCTCGGCCAGGGTGTCGCTCTTGCCGATGTAGCCGCTGATCAGCGGCGCCTGTCCCGAGG CCTTGGCATGGGCGCGGGCCAGGGCCCGGCCACAGACCCGGGCATAGGCGGCGAAGGTGTCTTCGTCGAAGGTCTCCAGTTCCGCCGAGACTTTCATGTC GCGCAACTGGCGCACGTAGAAGTGCCGGCCATTGGGCCCGGTGGTCCAGCCCAGGAACAGGTCGCTGGCGGACTGCATCAGGCGCTGGCCTTCCACCACC CGCTGGCCGTTGTGCCGTGGCCGCGAGCGTTCGCCCACATAGCCGGCGAGCACCGAGTGCCGGGCTTCCTTGAACTGCAGGAACAGCGGTCGCTGCTGGC
Amino Acid Sequence
>diguanylate cyclase
MENLGLDPSSGRSTSNRALTRATLLGCSGLLLALFLFTGVLLVYIAFDQNLAAERHNRLDIDKALQTFDTNARTTLKDYALWGDAYQYLHLSVDLDWAYT RQNFGPTLYRELGFDGVFVVNPRGHTVYSLVAGRLESMDAGQWLGDQLAPLVEEARRTAGGQASQRYLSIAGTPALAVADILSPGNDPQVRPDAGPQSVL IFVARLDPARLLALGQGMGIEQLQVAPGAPADGLPTLALPDGAGTLQWRPARPGHQLLVLVMPLLLLAGLLVGLMALFLLRRAGAAAQVMDQQVEALRAS RSALAASEERFRDVAEAASDWIWEVDPQLRFTYLSERFEAVTGLAREAALGSPMNDLLKPEQGSLRTWLAAPERRSQAILQCAYEDGQGQPRVCRLSVRA MAVGGYRGTASDITEEVAARRRIEYLSQHDALTGLANRTRMQEFLEGKLLTPPTLQEPLLMLSVDLDRFKPVNDLLGHAAGDQVLHEVSQRLSQCLRSKD LVARVGGDEFVLVVPGQVTAPEIEGLCRRLIERIEEPFYIAEHEVFISASIGIARAPTDAVLAEELLRFADIALYEAKAAGRSTWRFYAADMNVRIIERR RLERDLRHAIEQDQLLLQFLPRYRLGDGQLVGAEALVRWQHPQHGLLGPEVFGPLAEDTGLILPLSNWVLHAACRAARTWPERLLVAVNLSPTEFQRGQL VAQVRTVLGQSGIDPSRLELDMTDKALLDNSQQVLGIMQGLKALGVRLLLDDFGTGHSALQYLQTFPLDGLKIDSSFVAGLSQDETARSIVEAIIDLGHA LSLRVIAEGVETPEQLKVLRDIRCDEAQGPHLSPPLDSAALLALCDAGARASRSIL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site