Pseudomonas sp. PH1b, U873_RS0110940

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00052	duf2_2	IPR001633	EAL domain	598	840	7.2E-101
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	292	841	0.0
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	296	421	8.2E-16
CDD	cd00130	PAS	IPR000014	PAS domain	318	413	2.62077E-5
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	602	851	1.2E-88
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	422	601	1.1E-54
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	603	845	2.35E-79
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	432	589	1.33E-46
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	416	588	2.5E-62
SMART	SM00091	pas_2	IPR000014	PAS domain	309	377	3.0E-7
Pfam	PF08448	PAS fold	IPR013656	PAS fold-4	316	417	8.1E-6
Pfam	PF00563	EAL domain	IPR001633	EAL domain	604	835	6.6E-68
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	296	414	1.1E-14
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	428	583	2.0E-45
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	306	422	1.1E-10
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	424	585	4.6E-40
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	428	586	6.35188E-59
Pfam	PF05228	CHASE4 domain	IPR007892	CHASE4	66	216	3.2E-16
CDD	cd01948	EAL	IPR001633	EAL domain	608	840	3.25736E-92

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.