Pseudomonas sp. PH1b, U873_RS0110515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. PH1b Contig5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCCTTTCGCCGGCAAGCCGGCTCCTACGGGGCGGGGGTTGGCGCCGATTTCCCAGGCACCGCCCTTGTAGGAGCTGGCTTGCCAGCGAAGGCGTCGGCG GGGGCGGTGCCAGGCTTGAGGGCCCCTTCGCCGGCAAGCCGGCTCCTACGGGGCGGGGATTGGCGCCGATTTCACAGGCACCGCCCTTGTAGGAGCTGGC TTGCCAGCGAAGGCGTCGGCGGCTGCGGCGCCAGGCTTGAGGGCGCTTTCGCCGGCAAGCCGGCTCCTACGGGGCGGGGGTTGACGCCGATTTCCCAGGC ACCGCCCTTGTAGGAGCTGGCTTGCCAGCGAAGGCGTCGGCGGGTGCAGCGCCAGGCTTGAGGGCCCCTTCGCCGGCAAGCCGGCTCCTACACAGGGGGT GTTCGGCTGGGGTGAACGCGGGTATCAAAAATTCGAAATTCTCTATACGCAGCGCCTTGGGCACTCTTGCCTCTATCACAACAATAAAAAGGTGATGTCC
DNA Sequence for Gene
>U873_RS0110515
ATGTTCAAGCTTTCAAGGGCGCTGTGCTGTGCCGCTGCATTGTTCACCGCCGGCCTGGCCCAGGCCGCCGAATCCACCGGCAACCCTATCGTCATCAAGT TCGCCCACGTGGTGGCCGAGAACACCCCCAAGGGCCAGGGCGCGCTGCTGTTCAAGAAACTCGCCGAGGAACGCCTGCCGGGGCGGGTCAAGGTCGAGGT CTACCCCAACTCGTCGCTGTTCGGCGATGGCAAGGAGATGGAAGCGCTGCTGCTGGGGGATGTGCAGATGCTGGCGCCGTCCCTGGCCAAGTTCGAGCAG TACACCAAGCAGATCCAGATCTACGATCTGCCATTCCTGTTCGACGACCTGGCGGCGGTGGACCGCTTCCAGGCCGCCGAAGGCAAGCAGTTGCTGACGG CCATGCAGGGCAAGGGCATTCTCGGCCTGGCCTACTGGCACAACGGCCTGAAGCAACTCTCGGCCAACAAGCCCCTGCATGAACCCAAGGACGCCCGCGG CCTGAAGTTCCGCGTGCAGGCCTCCAGCGTGCTCGAAGAACAGTTCAAGGCCCTGCGCGCCAACCCGCGCAAGATGAGTTTCGCCGAGGTTTACCAGGGC CTGCAGACCGGCACCGTCAACGGCACCGAGAACACCTGGTCGAACTATGAAAGCCAGAAGGTCAACGAGGTGCAGAAGTACTTCACCGAGTCCAACCACG GCCTGATCGACTACATGGTGATCACCAACGCCACCTTCTGGAACGGCCTGCCGGCAGACGTGCGCGGCGAGCTGGAAAGCATCATGGCCGAGGTCTCGGT GGAGGTGAACAAACAGGCCGAAGCCCTGAACCAGAGCGCCAAGCAGAAGATCGTCGAGGCCAGGACCAGCGAAATCATCGAACTGACTTCCGAGCAGCGC CAGGCCTGGCGCGACACCGTGCGCCCGGTGTGGAGCAAGTTCGAGGACGAGATCGGCGCCGACCTGATCAAGGCCGCCGACGCCGCCAACCAGCGCCCCT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCATCCCTCCCGGCCGTCCGCAGCGGACGGCCACTGCTCGTTTCGCGAGGTATCTCTATGCAGTCCCTGAGACGTATCTGGGAGCACCTGGAGGAGGGCC TGATTGCCCTGCTGCTGGCGACCATGACCCTGGTGACCTTCGTCTACGTGATGCTCAACAACATCTACACCCTGTTCTTCGCCCTGGCTGACAAATGGGC CGCCAGCAGCGCCTTCTTCAACGTTCTGGGCGACACCACCATGGGCCTGGCCCAGGACATGACCTGGAGCGTGGCCCTGACCAAGGCGATGTTCGGCTGG CTGATCTTCTTCGGCATCTCCTATGGCGTGCGCACCGCCGGGCACCTGGGAGTGGACGCCCTGGTGCGCCTGACCCCGCGCCCGGTGCAACGCTACCTGG CGCTGCTGGCCTGCCTGTGCTGCCTGGTGTACGCCGGGCTGTTCATGGTCGCCAGCTACAAGTGGCTGAGCGCGATCATGGCCGCCCATATCGGCGCCGA
Amino Acid Sequence
>C4-dicarboxylate ABC transporter
MFKLSRALCCAAALFTAGLAQAAESTGNPIVIKFAHVVAENTPKGQGALLFKKLAEERLPGRVKVEVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEQ YTKQIQIYDLPFLFDDLAAVDRFQAAEGKQLLTAMQGKGILGLAYWHNGLKQLSANKPLHEPKDARGLKFRVQASSVLEEQFKALRANPRKMSFAEVYQG LQTGTVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVITNATFWNGLPADVRGELESIMAEVSVEVNKQAEALNQSAKQKIVEARTSEIIELTSEQR QAWRDTVRPVWSKFEDEIGADLIKAADAANQRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site