Pseudomonas sp. PH1b, U873_RS0108960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 24 | 51 | - |
| Pfam | PF08479 | POTRA domain, ShlB-type | IPR013686 | Polypeptide-transport-associated, ShlB-type | 57 | 131 | 2.0E-20 |
| Gene3D | G3DSA:3.10.20.310 | membrane protein fhac | - | - | 44 | 131 | 3.9E-26 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 26 | 45 | - |
| Pfam | PF03865 | Haemolysin secretion/activation protein ShlB/FhaC/HecB | IPR005565 | Haemolysin activator HlyB, C-terminal | 193 | 501 | 2.5E-34 |
| Coils | Coil | Coil | - | - | 71 | 94 | - |
| Gene3D | G3DSA:2.40.160.50 | membrane protein fhac: a member of the omp85/tpsb transporter family | - | - | 166 | 541 | 3.7E-89 |
| PANTHER | PTHR34597 | SLR1661 PROTEIN | - | - | 6 | 541 | 1.2E-118 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.