Pseudomonas putida S16, PPS_4526

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S16 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CACGTACTCGATGGCTTCGCCTTCACCGCCGATCTGCGGCGCGTCGACGCTACCGGTGATCGGCAACACTTCAAGGTACAGGCCATCGGTCAGGCGCTGG TTCAGGCGCAATTCTTCGTTACAGAAATGCCGGCGCTGGTCCAGGCCGGTGAAGTCGAGGAAGCCGAAGTTCATCGGCTTCTTGATCTTGTAGGCATACT CGCCGGTGAGCAGGACCCAGGAGATATGCGTCTCGATGAGCTGGAACCCATCCACGGGGTGAGGGTACAGGGCTGGGTTCTGCAACGCAGTGATAAGGGC TTGGCTCACGGGAAATCCTTCCGGGGGCAGGGAATTCGAATGCGCCATTATGGTCAATGGTGCCGTCCCTGCCTACCGCCGGGGGCGTCTGCCCAGCCTT TATAAAGTGCGTATAATCCGCCGCCATGACCCGAACTCGAAATCCCCGTACCCCTCAGAAACGCCCGACCGGCCGCTCCCGCGCCTGGCTGGGCTGGGCT
DNA Sequence for Gene
>PPS_4526
TTGAAGCTCAGCCTGGTCGGCCTGGTGTTAGTCGCCGGCTTCGCGGTTTACCTCGATGCCGTTGTCCAGGAAAAGTTTTCCGGCAAGCGCTGGACCATCC CGGCCAAGGTGTATGCCCGGCCGCTGGAGCTGTTCACCGGCCAGAAACTGAGCAAGAACGACTTCCTCACCGAGCTGGACGCGCTCGGCTACCGGCGTGA AAGCGCGGCCAACGGGCCGGGAGCGGCGGCAGTCAACGGCAACACCGTCGAGCTCAATACCCGTGGCTTCCAGTTCTACGAGGGCATGGAGCCGGCGCAG TTCGTGCGTGTGCGCTTCTCCGGCGATTACGTGGCAGGCCTTTCCGGCGCCAACGGCAAGACGCTCGACGTAGTGCGCCTGGAGCCGCTGATGATCGGCG GCATCTACCCGAAAAACCTCGAAGACCGCATCCTGATCAAGATCGACCAGGTACCGCCGTACCTGCTCGAAACCCTGGTGGCGACGGAAGACCGCGATTT CTACAGCCACTTCGGGGTGTCGCCCAAGTCCATCGCCCGAGCCATGTGGGTCAATACCTCGGCAGGTTCCATGCGCCAGGGTGGCAGCACCCTGACCCAG CAGTTGGTGAAGAACTTCTACCTCACCAGCGAGCGCAGCCTCAGCCGCAAGCTGACCGAGGCGATGATGGCCGTATTGCTGGAGCTGCACTACGACAAGC GCGAGATCCTCGAGGCCTACCTCAACGAGGTGTTCGTCGGCCAGGATGGTCAGCGTGCGGTGCACGGCTTCGGCCTCGCCAGCCAGTTCTTCTTCAGCCA ACCGCTGTCGGAGCTGAAGTTGCACCAGATCGCTTTGCTGGTGGGCATGGTCAAGGGGCCGTCCTACTACAACCCGCGTCGCTATCCGGACCGCGCCCTG GCCCGCCGCAACCTGGTGCTCGACCTGGTGGCCGAGCAGGGCGTGGCCAGCCAGGCAGAAGTCGATGCAGCGAAGAAGATGCCGCTGGGCGTGACCAAGC GCGGCAGCCTGGCAGACAGCTCGTTCCCGGCCTTCCTCGACCTGGTCAAGCGTCAGCTGCGCCAGGACTACCGCGATGAAGACTTGACCGAAGAAGGCCT GCGCATCTTCACCAGCTTCGACCCGATCCTGCAGATGAAGGCCGAAACCTCGATGAGCGAGACCTTCAAGCGCCTCGCGGGGCGCAAGGGGGCGGACGAG GTTGAGTCGGCGATGGTCGTGACCAATCCGGAAACCGGTGAGGTGCAGGCGCTTATCGGCAGCCGCCAGGCCGGCTTCGCCGGCTTCAACCGCGCCATTG ATGCCGTGCGGCCGATCGGTTCGCTGGTCAAGCCGGCGGTGTACCTGACCGCGCTGGAACAACCGACCAAGTACACCTTGACCAGTTGGGTGCAGGACGA GCCGTTCTCGGTCAAAGGTGCCGACGGCCAGGTCTGGCGCCCGCAGAACTACGATCGTCGCCCGCATGGCACCATCTACCTGTACCAGGGGCTGGCCAAC TCCTACAACCTGTCGACTGCCAAGATCGGCCTGGAAGTGGGTGTGCCCAACGTGATCAAGACCATTGGCCGGCTGGGAGTGAACGTTGACTGGCCAGCCT TCCCGGCCATGCTGCTGGGTGCCGGCGGCATGTCGCCAATGCAGGTCGCGACGATGTACCAGACCATCGCCAACGGCGGCTTCAATACCCCGATGCGCGG TATCCGCAGCGTGCTCACCGCCGAGGGCGAGCCGCTAAAACGCTACCCGTTCCAGATCCAGCAAACCTTCGACCCGGGGGCTATCTACCTGGTGCAGAAC GCCATGCAGCGGGTGATGCGCGAAGGCACCGGCCGCTCGGTGTACAACACTTTGCCGCGCAATCTCACCCTGGCGGGCAAGACCGGCACCAGTAACGATT CGCGCGACAGCTGGTTCTCCGGGTTCAGCCAGGACCTGCTGGCCGTGGTATGGATGGGGCGTGACGACAACGGCAAGACGCCATTTACTGGTGCTACCGG CGCCCTGCAGGTGTGGACCAGCTTCATGAAGAAGGCCGACCCGCTGCCGCTGGACATGCCGCAACCGGACAACGTGGTGCAGGCCTGGATTGACCCGTAC AGTGGCCATGGGTCTGATGGCAGCTGTCCGGGAGCGGTGCAGATGCCGTATATTCGCGGGAGTGAACCGCCCGCCGGCGCGACCTGCGGCGGCGAGCAGG ATCCAGTTGAATCGGTCATGGACTGGGTCAAGGGCTGGATGAATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACAGGCTGCATTGATGAGGTGTGACGTGAACAAGTGGCTGTTTCCTGCCGTGACGGCGCTGGCTGTGCTCCAGGGGTGCGCCAGCGTCCCGCGCGGCA ATATTCCGGTGGTCGACTCGAGCACCCGGGTGTCCAACAGCGAACGCGTGACGGCCAATCGCTCTGCGGGTGGCTATAACGCGGGTACCGCGCAGGCTCA AACGCTGCCTGAAGACTCCGGCGTGACCGTGATGATCCCGCAGGGCGCTGGCGCTTCGGGCATCCAGACGTTCCCGGCGGCCAATGGCGCGGCGCCAATC AGCACCTCGCCGATTACCCCGGGGCCGATCACCCCAGGCCCAATTACCACTGGGCCGGTCACTTCGGCACCAATGACCACCAATCCGAACCCGATCGCCG ACGAACCCTTCGACATCGCGGCGATGAACAGCGCCCCGCAAAGCACCAGCGCGCCAACCGGTATTCCGCGTAGCGGTGCTGCTACCGGTGGCCTGTCGGC
Amino Acid Sequence
>penicillin-binding protein 1B
MKLSLVGLVLVAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFTGQKLSKNDFLTELDALGYRRESAANGPGAAAVNGNTVELNTRGFQFYEGMEPAQ FVRVRFSGDYVAGLSGANGKTLDVVRLEPLMIGGIYPKNLEDRILIKIDQVPPYLLETLVATEDRDFYSHFGVSPKSIARAMWVNTSAGSMRQGGSTLTQ QLVKNFYLTSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRYPDRAL ARRNLVLDLVAEQGVASQAEVDAAKKMPLGVTKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKAETSMSETFKRLAGRKGADE VESAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPAVYLTALEQPTKYTLTSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLAN SYNLSTAKIGLEVGVPNVIKTIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLKRYPFQIQQTFDPGAIYLVQN AMQRVMREGTGRSVYNTLPRNLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNVVQAWIDPY SGHGSDGSCPGAVQMPYIRGSEPPAGATCGGEQDPVESVMDWVKGWMN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site