Pseudomonas putida S16, PPS_4319

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppt02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	234	392	5.4E-35
Pfam	PF00563	EAL domain	IPR001633	EAL domain	412	647	5.4E-76
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	223	396	4.8E-43
FunFam	G3DSA:3.20.20.450:FF:000001	Cyclic di-GMP phosphodiesterase yahA	-	-	407	662	2.5E-102
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	223	397	2.8E-43
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	239	396	1.57E-35
CDD	cd01948	EAL	IPR001633	EAL domain	413	652	2.54333E-113
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	411	661	1.29E-93
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	230	394	1.6E-29
PANTHER	PTHR33121	CYCLIC DI-GMP PHOSPHODIESTERASE PDEF	-	-	178	662	0.0
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	407	667	2.7E-103
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	235	394	3.0618E-35
SMART	SM00052	duf2_2	IPR001633	EAL domain	406	652	3.1E-116

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.