Pseudomonas putida S16, PPS_1407

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S16 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GACGGGTCGGGCACGTGCTCGAGCATTTCCAGGCAGGTGACCACGTCGAACTGTTCGGGCATTTCCTCGGCCAGGGCTTCGGCGGTGATCTGCCGGTATT CCACCTGCACACCCGACTCCAGCTGGTGCAGCTGGGCCACGGCCAGTGGCGCCTCGCCCATGTCGATGCCGGTGACCGTGGCGCCGCGCAGGGCCATCGC CTCGCTGAGGATGCCGCCGCCGCAACCCACGTCCAGCACCTTCTTGCCGGCGAGGCTGACGCGCTCGTCGATCCAGTTGACGCGCAGCGGGTTGATTTCG TGCAGCGGCTTGAACTCGCTTTCGCGGTCCCACCAGCGGTGGGCCAGCGCTTCGAACTTGGCGATTTCGGCGCGGTCGACGTTGCTCATTAGAACAGTCC TCTGAAACTTCGCAAAATTGCGCCGGAGTATACCCGAGCGCTCGGCCCCGAGGGTCGCTATAATCGCCGGCTTTTGATATCCGAACGACGGGGAGAGGCG
DNA Sequence for Gene
>PPS_1407
ATGCGCGAGCGACTTTTGGCGGCGGAGAAGGTGACCGGGATCCGCTGGCAGGGCGGCGTCCTGCACCTGCTCGACCAGCGCCTGCTGCCGTCGGAAGAGC GCTGGCTGGCCTGCGACAATGTCGCGCAGGTTGCAGCGGCGATCCGCGACATGGCCGTGCGCGGCGCCTCGGCCATCGGCATTGCCGCGGCCTATGGCCT GGTGCTGGCCCTTGAGGAGCGGCTGGCCGAGGGCGGCGACTGGGAAATGGACCTGGAGGAAGACTTCCTTGTCCTGGCTGAAGCGCGCCCTACCGCCGCC AACCTGTTCTGGGCGCTGAACCGCATGCGTGAGCGCCTGCAGCGCCTGCGTCCGGACGAAGACGTGCTGGCGGCACTGGAGGCCGAAGCGGTGGCCATCC ACGAGAGCGATCGCGAGGCCAACCTGACCATGGCCCAGTACGGTATCGAGCTGATTCGTCGCCACCAGGGCAACGCCCAGATCCTGCTCACCTATGGCAA CGCCGGTGCTTTGGCCTGTGGTGGTTTCGGTACCGCACTGGGGGTGATCCGTGCCGGTTACCTGGAGGGCATGGTCGAGCGTGTATACGCTGGCGAGACC CGCCCCTGGTTGCATGGCTCGCGCCTGACCGCCTGGGAACTGGCCAACGAAGGCATCCCGGTGACCCTGTGCGCCGACTCGGCGCTGGCCCACCTGATGA AAAGCAAGGGCATCACCTGGGTGGTGGTGGGCGCGGACTGCATCGCCGCCAACGGCGATGTGGCCAGCAAGATCGGCACCTATCAGCTGGCGGTCAGCGC CATGCATCATGGCGTACGGTTCATGGTGGTGGCGCCGAGTACCAGCATCGACCTGAACCTGGCCACGGGCGAGGACATCCCGCTGGAAGAGCGCGCTGCC GACGAGTTGCTGGACATTGGCGGCACCCGCGTGGCGCCGGATGTCGAGGTGTTCAACCCGGTATTCGACGTGACCCCGGCCGACCTGATCGACGTGATCG TGACCGAGCGCGGCATCGTCGAGCGGCCGGATGCCGCCAAGCTGGCGCAATTGATCTGCCGCAAGCGGCTGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATTCGTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGGATAGCACAAGGCCTGAGGATGGTGGTGTACCTGTGGGAGCGGGTTTAC CCGCGAAGAGGCCGGCACAGGCTATAAAAAATCCAGATTCAACCTCGTGTGAGGCCACCTGCCACATCTCCCCACCGCCCCTGCCTTTGTGATAACATCC GGCAGTTTCCAAGACCGCCCACCACGGCGGCCTTCATTGCGCAGATCCATGGCACAACTCATTGATTTGTCGTAAGTCGTCGCACCCTTATGCGCTGCGG CGGCGAGCTTCGTTCGGCCCTTGATGGAGCTGCGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCA ATATCGAAGACGAACTGAGACAGTCTTACCTCGACTACGCGATGAGCGTGATTGTCGGGCGAGCGCTGCCCGATGCGCGTGACGGCTTGAAGCCCGTGCA
Amino Acid Sequence
>methylthioribose-1-phosphate isomerase
MRERLLAAEKVTGIRWQGGVLHLLDQRLLPSEERWLACDNVAQVAAAIRDMAVRGASAIGIAAAYGLVLALEERLAEGGDWEMDLEEDFLVLAEARPTAA NLFWALNRMRERLQRLRPDEDVLAALEAEAVAIHESDREANLTMAQYGIELIRRHQGNAQILLTYGNAGALACGGFGTALGVIRAGYLEGMVERVYAGET RPWLHGSRLTAWELANEGIPVTLCADSALAHLMKSKGITWVVVGADCIAANGDVASKIGTYQLAVSAMHHGVRFMVVAPSTSIDLNLATGEDIPLEERAA DELLDIGGTRVAPDVEVFNPVFDVTPADLIDVIVTERGIVERPDAAKLAQLICRKRLH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site