Pseudomonas sp. MOIL14HWK12:I1, PSEK12I1_RS23675
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I1 PseK12I1DRAFT_scaffold_0.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGGCCAAGAGCCCCTATGCCCTGGTCAGCCACAAGCTGCGCGAGGAAGACGGCACCTCCACCGTCGACATCAAGGTCGCCGTCGAAGGTCGTACCGAG CACTGGCACGGCACCGCCAAGGGTCCGCTGGAAGCCCTGGTCGCCAGCCTGCCGCAGGCGGTGGAAATCATGGACTACCACGAGCACTCCATCGGCGCCG GCGCCAACGCCAAGGCCGCATCCTACATCGAGGTCCGCCTGGAAGGTCAGCGTCCGCTGCATGGCATCGGCATCGACGAGAACATCACCACCGCCAGCTT CCGCGCCCTGCTCAGCGCCCTGAATCGCGCGGTGACCCAGGCCCAGGCCAAGGCCGCCTGAAACTGACATTCGTCAAACCAAAGGGAATACCTGTCGGTG TTCCCTTTTTTTATGGCGAATCAGCGGAGATACTCCCCGCTTCCTAGGGATCGTCTCGCCTGCCCGCTTCGGCCAGCCGGGCAGCTTGTCTGGATAGGCA
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| DNA Sequence for Gene |
>PSEK12I1_RS23675
ATGACCTTCACTCTGTCGCGAAACACCTCTCTGCTGCGTGACGCCACCGCGCTGGCGCTGCTGTTCCTGATCAGTTCGGTCCTGTGCATCCTCTTCACCC GCCAGGCGTCCTCCACCGTGGCCACCCTCTGGTTGCCCAATGGCCTGGCGATCGCCTGGCTGCTGCGCTCGGCGCCCCGGCGCTGGCCGCTGCAACTGCT GGCGGTCTGGCTGGCCGGCGCCCTGGCCGAATTGCCCTTCAGTGGGGACCCGGCCATCGGCGCGCTCTATTCCCTACCCAATCTGGCCGAGATCCTGTTC GGCGCCTGGCTGCTGCATGGCCGCATCCTCCATCCCGAACGCAATGTCGCGGCCATGGGACGACTGCTGTTCTACGGGGTGCTGGTGACGCCCCTGGCCG GTACCGCCCTGGGCACCCTGATCGCCGCTCAGCAGGGCAATCCCGAGCTGCTGCGGGTGGCCCTGCACTGGTACCTCGGCGACGCCCTCGGCCTGCTGGT GATGATGCCCCTCGCCTTTCTCGGCCGCCCGCTGCAGTGGCGGCAATTCAGTCGTCAGGGTGCCCGTGAGTTCATCGTCCTGCTGCTGATCAGCCCCGTG CTGGTGCTCGGCCTCCTGGCCTATGTGCCCTACCCCTTCGTCTACGTCTCCACCCTGCTGCTGCTGATGACCCTGAGGCTCACCGCCCTGGGTACCGCGG TGGTCGGCGGCCTGAACATCCTGATCTTCACCTACCTGGTGGCCCACGGTTATCTGCTCGGCGTCCGCGGCGCCACCCTGGTGCAGGAAGCCCTGACCTA CATTCCCGTGGCCCTGATGCAGATTCCCCCGCTGCTGCTGGCCGCCGCCGTGCAGCAGAGCCGTCACCACAACCAGCGCCTGGCGCGCAACGAGGCACGC TTTCGCCATGCCCTGAGCGCCGCGCCCTATGGCATGGCACTGCTGTCGGTGGAGGGCCGCCTGAGCCAGGTGAATGCCGCCCTGGAGGCCATGCTCGGCT ATCCGCGCCACAGCCTCGACGGCCGGTCGCTCAAGGAGTTGATCGCCGATGGCGAAGAACCCCTGACGATCGAGGAAGGCGAGCAGACCCGCCGGCTGCT GCACCGCGACGGCCAGGGACTGTGGATGCAACTGGCGCTGTCGCCCGACCATGATGATGGCGACCTGCTCACCGGCTATCTGCTGCAGGCCCGCGACATC GACGCCCAGCGCCGCGCCGAGGCGACCAACGCCCGGCTCCGCGAGCGACTGCAACTGGCCATTCGCGCCAGCAACGTGGGGATCTGGGAGTGGGATACCC GCAGTCCGGGTTTCAATGCCGATGCACGGCTGCGCGATCTCTATGGCATCGCCCCGGACAATCTCAGTCGGGACATGGACTTCTGGCTCACCTTCATCCA CCCGGACGACAAGGCGCGTTCGCTGGAGGTGTTCGACAAGGTCGCCAGCGAGTCGATGTTCTACACCTTCAACTTCCGCATCAACCGCGGCGGCCCCGGC GGCGAGGTGCGCCATATCCGCTCCGAGCTGATCTCGGTGGTCGAGGCCGACGGCCATGTACGCCTGGTCGGCAGCAACAGCGACGTCACCGAGCACCACC AGCTGACCACGGCGCTCTACGAGGAAAAGGAACGACTGCAGGTCACCCTGGCCTCCATCGCCGACGCCGTGCTGACCACCGACATGGATGGGCGCATCCT CTTTCTCAATCCGGTCGCCGAGCAGCTCACCGGCTGGTCGCTGGCGGATGCCCGGGGCCGGCCCCACGAAGAGGTGTTCCTCATCCACGACAGCCAGAGC GACGAGGTCCTGCCCAGTCCGGTGACCCGCTGCCTGCGCGAGCAGACCATCACCTCCCTGGACGAGGGCGCGGTGCTGCTCAGCCGCCAGGGTGACAGGC ACGAGGTGCAGGATTCGGCCGCGCCGGTGCGTACGGTGGATGGCCGCATCATCGGCGCGGTGCTGGTGTTCCAGAATGTCACCCATGCCCGCAATCTGCA GCGCGAGCTGAGCTACAACGCCTCCCACGACGCCCTGACTGGCCTCTACAATCGCCTGAAGTTCGAGCAGGAGCTGGACGCCGCCTGGCAGCAGGCCCAG GCCGGGACCGTCCAGCACGCGCTGTGCTTCATCGACCTCGATCGCTTCAAGGTAGTCAACGATTCCGCCGGCCATGCCGCCGGCGATCTGCTACTGCGCG AACTGGGCACCCTGCTGCGCGACTCCCTGCGCGGCTCGGATGCCGTGGCCCGGATCGGCGGCGACGAATTCGCCCTGCTGCTGCGCGACTGCGATCTGGT GCAGGCCGAGGCCGTGGCCGAAAAGCTCATCGCCAGCATCGGCGCCGTGCGCTTCAACTGGCAGAGCCGGATCTACGACGTCGGCGCCAGTGCCGGCATC GTCGCCATCACCGCCGAAACCCCGAGCCCGGCCGAATTGATGAGCCAGGCCGACGTGGCCTGCTATACCGCCAAGCACGCCGGGCGCAATCGCGCGGCGC TCTATCGCGCCGGCAGCGAGGACGTCGAGCGCCAGCACCGCGAGATCCTCATGGCCAGCGGCCTGCGCGAGGCCCTGGAGCAGCATCGCTTCGAACTGCA CGCCCAGACCATCGTCCCCACCCGGAGCCGTGGCGGCGCGGCGCAGCATGTCGAGCTGCTGCTGCGCCTGCGCGATGTGCAGGGCCAGCTGATCTCGCCG GCCACCTTCATCCCGGCCGCCGAGCGCTTCGGCCTGATGAGCAGCATCGACCGCTGGGTGGTGCGTCAGGTGCTGGTCGAACTGGTGCCCTGGCTGCAGG AACGACCCGGGTTGCACGTGGGCATCAATCTCTCGGGCAACAGCCTGAGCGATCTCGACTTCCTGCCCGAATTGCTGGAGCTGATCGCGGCCTCGCCGCT GGATCCGCAGCGCCTGCTCTTCGAGCTGACCGAGACCGCGGTGATCAACAAGCTCTCGGTGGCCTCGGCGCTCATCAGCCAGGTCCGCGAACGCGGCTGC CGCATCGCCCTGGATGATTTCGGCGCCGGCCTCAGCTCCTTCGCCTACCTCAAGCACTTCCGCGTCGACTACGTGAAGATCGACGGCAGCTTCATCCGCA GCCTCGACCAGGATCCGCTGGATCGCGCCATCGTCGAATCCATCAACCAGGTCGCCCACCACCTCGGCGCCGAGACCATCGCCGAATTCGTCGAGTCCCA GGCCACCTTCGAATTGCTCGGCACCATCGGCGTGGACTACGCCCAGGGCTATGCCCTGGGCAAACCCCTCCCCCTGCGGGAGTGGCCCGGGCCTCCGCGC CTCGAACCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCGGCCATCGGTCGTAACCTGCATGACTCCCCCAACCGGATGAGGATTCCATGCACACTCGTACCCTTGGCCACTCAGATCTCCAGGTGCCCCCGCT CTGCTTTGGTGGCAATGTCTTTGGCTGGACCCTGGACGAAGCCCAGTCCTTTCGCATGCTGGATGCCCTGCTCGAGGCGGGCCTGACCTTCATCGACACC GCCGACGTCTATTCGCGCTGGGCGCCGGGCAACAGCGGCGGCGAATCCGAGACCCTGCTGGGCAAGTGGTTCGCCCGCAGCGGCAAGCGCGACCAAGTGA TCCTGGCCACCAAGCTGGGCATGGACATGGGCGAAGGTCGTAAGGGTCTCAAAGCCAGCTATGTGCAGCAGGCAGTGGAAGCCTCGCTCAAGCGCCTGCA GACCGATCGCATCGACCTCTATCAGGCGCACTGCGACGACGAGGACACCCCGCTGGAGGAAACCCTGGGCGCCTTCGCGCGGCTGGTGGAACAGGGCAAG
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| Amino Acid Sequence |
>diguanylate cyclase
MTFTLSRNTSLLRDATALALLFLISSVLCILFTRQASSTVATLWLPNGLAIAWLLRSAPRRWPLQLLAVWLAGALAELPFSGDPAIGALYSLPNLAEILF GAWLLHGRILHPERNVAAMGRLLFYGVLVTPLAGTALGTLIAAQQGNPELLRVALHWYLGDALGLLVMMPLAFLGRPLQWRQFSRQGAREFIVLLLISPV LVLGLLAYVPYPFVYVSTLLLLMTLRLTALGTAVVGGLNILIFTYLVAHGYLLGVRGATLVQEALTYIPVALMQIPPLLLAAAVQQSRHHNQRLARNEAR FRHALSAAPYGMALLSVEGRLSQVNAALEAMLGYPRHSLDGRSLKELIADGEEPLTIEEGEQTRRLLHRDGQGLWMQLALSPDHDDGDLLTGYLLQARDI DAQRRAEATNARLRERLQLAIRASNVGIWEWDTRSPGFNADARLRDLYGIAPDNLSRDMDFWLTFIHPDDKARSLEVFDKVASESMFYTFNFRINRGGPG GEVRHIRSELISVVEADGHVRLVGSNSDVTEHHQLTTALYEEKERLQVTLASIADAVLTTDMDGRILFLNPVAEQLTGWSLADARGRPHEEVFLIHDSQS DEVLPSPVTRCLREQTITSLDEGAVLLSRQGDRHEVQDSAAPVRTVDGRIIGAVLVFQNVTHARNLQRELSYNASHDALTGLYNRLKFEQELDAAWQQAQ AGTVQHALCFIDLDRFKVVNDSAGHAAGDLLLRELGTLLRDSLRGSDAVARIGGDEFALLLRDCDLVQAEAVAEKLIASIGAVRFNWQSRIYDVGASAGI VAITAETPSPAELMSQADVACYTAKHAGRNRAALYRAGSEDVERQHREILMASGLREALEQHRFELHAQTIVPTRSRGGAAQHVELLLRLRDVQGQLISP ATFIPAAERFGLMSSIDRWVVRQVLVELVPWLQERPGLHVGINLSGNSLSDLDFLPELLELIAASPLDPQRLLFELTETAVINKLSVASALISQVRERGC RIALDDFGAGLSSFAYLKHFRVDYVKIDGSFIRSLDQDPLDRAIVESINQVAHHLGAETIAEFVESQATFELLGTIGVDYAQGYALGKPLPLREWPGPPR LEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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