Pseudomonas sp. MOIL14HWK12:I2, PSK12I2_RS0121300
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I2 PsK12I2DRAFT_scaffold_2.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGAGACCGCACTCAGGGCCGGCGAGGGCGTGATCGGCAGAGCCGTTGCCGCGCCGGACTTGGCAAGCACCTGTACCGTGACCTTCTGCATTCCCTATC AGCTGCGCAACAACGCCTACCTGAACGCCGGAGGTGCTGCCCTGGGTAGCGAGACGATCGGCAAGCTCAGCGTCCCTCTGGGGTACATGACGCCGCTGTT CCGTAACGGCGACCCGAGCGCAGCCCTCGACGGCTACAGCATCTTGAGCTCAGGCACCACGACGGAAACGCCCAATGCCCGCTGGTACGTGGTCGATCTA GGTCCGCTGGATAGCGGTAGCGAGAACAACTGCGCCCTGACCGGGTGCGGCACGCGCTACTACGAGGTGGACAGCTGTGCGGGTGCTGGCTGTGCGAGCG ATCAAGTTGGCCAGCGGATCACCTACCGCTCGGTCATGGCCAAGAGCTTCTAATGCGCGAGGACGCGTCGATGAACGTTCAAACCGGTCGTCACGGTTGG
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| DNA Sequence for Gene |
>PSK12I2_RS0121300
ATAGCGCTGCTGGCAGCCCTGGTCTTCTCCAGCCTGGCACAGGCCACCACGACCTTTCCCAGCCAGTCGCCCCTGTTCGTGAGCCAGGCGGAGCCGCCCT TGGCGATGTTGGTATTGGGCAAGGATCATTCGCTGTTTTTCGAAGCTTACAACGATGCCAGCGATATCGACGGCGATGGCGTACTGGATCTGAAGTTCAA GCCGGCCATTGCCTACTACGGTCTCTTCGACTCGACCCTGTGCTACAGCCATTCCGGTGGTAGCGGCAACGGCGACAAGTTCACCCCCATCGGGAAGGCC GTCAGCAATAGCGCCGGGACCTATGCCACCTGCTCGGGGAGCTGGTCCGGCAACTGGCTCAACTACGTCACCACCAGTCGCATCGATGCCTTGCGCAAGG TGCTTTATGGCGGCTATCGACAGCTCGATGACACCTCCCAGACCGTCCTGCGGCGGGCCTACATTCCGCAAGACGGCCACTCCTGGGCCAAGGAGTACAC CAGCGTCGCCGTCGATGGCTACGACATCGCCAATTTCACGCCCCTGAGTGCGCCTGCCAACGGCACCCGATTGTTCTTCGGCAACGTGACCATGACTGCC GGCACCAACTGCAGTGTCTTGAGTTCCTGCAGTAACCTGCCGCCGTTGTTGTCCGTGGTCAAAACCGCGGATACCACCACAAGGGTCTGGGATTGGGCGT CTTCGGAATCTCCGGTGCTCAACAACAACACTTACGGTAAGGGTACCCGTACCAACTACACCGTACAGGTAGCGGTCTGCACGAGTGATTATCACGACAA CGACTGCCAGGCCTATCCAAACGGGCAGTACAAACCGGTCGGATTGCTGCACGACTTCGGTGCCGACGACGCCATGCTTTTCGGCTTGTTGACGGGCAGC TACAACAAGAACATGTCCGGTGGCGTGCTGCGCAAGGTCGTATCCAGGTTCAGCACTGAAGTGAACGCCAATACCGGGGTCTTCAGCGCCAATGCCACCA TCGTCAGAGCCCTGGATGCGTTGCGCATTCGCGACTACAACAATGGCAGCAATGGCAGTGCCTATCGGCGTGGCAGTTACCGGGCGGGCATCATGCCGGA AGGCAATTATCCCGATTGGGGCAACCCCATCGCCGAGATGATGTACGAAACGTTGCGTTATTTCGCCGGCAAGGCTGCGGCGACCGCGGCCTTTACCGGA AACAACAGCGACACCGGGCAGAATGAAGACGCCAACGTGGGGCTTCCACAGCCGGCGTGGGACAACCCCTATGCCAGCAACAGCGCAGCCAATGCCCACT GGTGCGCCAAGCCCAACATGCTGGTGATGAGCAACGTCAACGTCTCCTACGACTCGGATCAGTTGCCCGGCAGTGCCTTTGCGTCCTTCAGCGGCGATCT CAGCGGTCTTGATGTCAGCGCCCAGGCCAGGGCCATCAGTGCCCTGGAGCCCTCGGTGGCCGGTCAGCGTTACATTGGTGCGGTAGGCAGCAACGAGGAC TATGCGCCTACCGCCAAGACGGTCACCACTCTCGCCAACATCCGCGGCTTGGCACCTGAAGAACCCACCAAGCAAGGCAGCTACTATTCGGCCTCTGTGG CTCGCTATGGCGCGAACACCGATTTGAACAGCGCCTCGGGCGATCAGAAAACCAATACCTACGTTGTCGCCCTGGCATCCTCCCTGCCGAAGTTCGAATT CAACGTTGGCGGCAAAACCGTTTCCCTGGTGCCCTTTGCCAAGACCATCAACGGTGTCGGCACCAATCGAAGCAGGGGTAACTACCAGCCCACGGACGCC ATCGTCGATCTGTACGTCGAATCCTACAGCAGCACAGGCGCAGTCTTTCGCGTCAACTACGAGGCCGATGAACAGGGCAACGATTTCGATAGTGACGTCA TCGTCAAGTACGACATCAGCGTAGCCAGTGGTCAGCTAAAGGTGGTGGTGACCCCTACGGCCCAGTCCACCGGCAGTAATCAGAACCTGGGTTACGTGAT TTCCGGGACCAATCGTGACGGAGCCTATCTCGTCACCCAGGACAAAAACGCCAGCCTCAAGTACTTCCTCAACGTACCGCCAGGCCAGGATGCCGGTTAC TGCAACTACAGCTCCGAGGCGAGCATGGCGGCTTCCTGTGCCCAACTGCCTTGGATCAATGGAAACCCAGCGGCCAGTACCCAGCTGTTCACGCCGGGCA ATACGGCGGCTACCACGCTCAACAATCCGCTGTGGTTCGCCGCCAAATATGGCATCGCCGGACGCGATACGACGGGGATCGTTGGCGATCCGGATAACTA TTTTCTGGTCACCAACGCCGCGAGACTGAAAAGTCAGCTGCGCGCTGCGTTGAGTCAGATCTTGCAGAACAACAATTCCGTGGCAGCGCCGGCGGTGTTG CCCTCCCTGAGCACCAGCAGTGGCACGACCACCAACTATGACACCTATGCCACGGGTCTAAACGTGACGTACTGGAGCGGCGAGCTGACCAAGACGACAG TGGCTATCGGCACTGCCAACGGTGCTACGAACAAGACCACCACTACGGCCTGGAAGGCCAGTACAGTGATGCCCGCCTGGACCGACCGCACCATTCTGAT TCCTGCGGTTCCCGGTACGGGAACGGGGCTACGTTCGTTCACCTACAAGAATCTTGCGGACCGTACCTACGACGGCAAGCCCCTGCAAACCAATCTGGAC GCCGATAAGGTCGATTTCCTCAAGGGCGATGCGTCCAAGGAAGCCTCTCTCTACCGCAAGCGCTCTTCCTTGTTGGGCGACATCGTCAATTCTGCGCCCG CAGTGGCCAGTGGCGCCCAGTACCTGACCAGTGCTGCCAATGCGCTGGAAGGCGCCACGGGTGACTATGCAACCTTCAAGGCTAACCAGGCGCGTGTTGC GCCCATGGTCTACGTCGGTGCCAATGACGGCATGTTGCATGGTTTCAATGCCAATACGGGAAAAGAGACCTTCGCCTTTATCCCCACGGCGGTGATTCCC AACCTCTATCAGTTGGCCCGTTCTACCTATAACGACGCCTCTGCTTCGCTCCATACCTACTATGTGGACGGCTCGCCCGTCATTGCCGACGTCTTTTTCG GACAGCAATGGCGTAAGGTTCTGATCGGCACTTTGCGTGGAGGCGGTAGAGAGGTCTTCGCGCTGGATATCACCGATCCGACATCGCCCAAGTTGTTATG GGAGTTCACCGGGGCGGACATTCGCACCAACCCTGCCAACGGCAGCGCGCAAGGGGTAACGAACTCGCGTAGCGACCCCACGCTGGGCAACAGTTTCGGT ACTCCGCTGGTGGTTCGATTGCACACGGGGCAGTGGGCAGTGCTGTTTGGCAATGGCTATGACGGTAACGGCCGCAAGGCCGCGCTTTATGCATTGAACG TGGCGGATGGCTCTGCCATCGGCAGCAATTTTCCGCTGGTTGTCGAGGCCGGCAGCAAGAGCAACGGTTTATTCAACCTGAAGTCTCTGGACGTCAACTC TGATGGTATCGCCGACTATGTCTACGGCGGAGACCTGCAGGGTAATCTGTGGCGGTTCGATCTGGTTGCCGACGGTAACCTCACGAGCTCGGCACGCGCC TCGGACTTCAAGATTTCCTTTGGTGGTAGTCCGCTCTACCAGGCAAGGAGCCGTGACAAGAACGGTACCGTCCAACCCATCACGGCGCCGCCGTCGCTGG TTCGTCATCCATCCGGCCAAGGCTTCGTGGTGATGTTCGGCACCGGCAGCTATTTTTCCCTGGAAGACAAGTCGTCCACCGACCTGCAGAGTATCTATGG CATATGGGACAAGAATGTCGCCACGGTCTCTACCTCCAATGCCGCAGCCACTACGCCGACGCTCAATCGCGCCTCTTTGCAACAGCAAGCCTTTTCCCAA GAGAGCTCTCTGAGCGGCAAGGCCGTGCGAGTACTCAGCAACAACAGCGTGAACTGGTCTGCGGCAAGTGGCTGGTATCTCGACCTCGCCTACGGTGGCG TCCAGCTCGGCGAGCGTATGGTTGATCCCATGACAGCCAGCGGTCAGGCGCTATTTTTCAGCACTATCACGCCCAATAGTGAAGTCTGTGCAGCAGGGAT CTCTGGCTGGACCTATGCGGTGGATCCAAGTTCGGGAGGGCGCACGACGTTCAATGTGTTCGACCTCAATGGCGATGGCGTGGTCAACGCTGCGGACAGT TCGAATGATACGGTGATCTCTGGATTCGACATGCCTGCAGGAGGAACTACGCTCTCGGGTAGCCAGCTGGGCAGTACGGACGCCAACTTGACCACCATCA ATAAGGGCCCTCAGGCATCGGGCCGGCAAACCTGGCGGGTAATACCGCAACCTCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTCGGGAGACAAACTCAGCATGACCAGTACCCGGGGCTTTACCCTGATCGAGCTGATGATCACCGTTGCCATCGTTGGCATCCTGGCCGCCATCGCCTA TCCGAGCTACCAAAGCTACATCCTGCGCAGTCATCGTTCGGAGGGCATGGCGCTGCTCAGCGAGGCAGCGGCTCGGATGGAGCGTTATTACGCGCAGAAC AGCACCTATGCCACGGCGTCCCTTAAGGGCCTGGGCCTGACTAGCGACGATAAAGCCACATCTCTGGACTCATCGAACAAGTATTACTCCCTAAGTCTTG GTACCCCTACAGCCACTACCTACAACCTGAGCGTGGCGCCGCGGAACGCGCAGACCAAGGACAGCTGCGGGACCTTGACACTGGATTCCACCGGCCTGCG CGGTGCAGCAGGCACGACCGCAGACAAGGACGCTGCAACCGTTACCAACTGCTGGCGCTAATCCTCCCGTCCCTGCACCAGGCCGGCATCCCTGTCCTGT
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| Amino Acid Sequence |
>hypothetical protein
MALLAALVFSSLAQATTTFPSQSPLFVSQAEPPLAMLVLGKDHSLFFEAYNDASDIDGDGVLDLKFKPAIAYYGLFDSTLCYSHSGGSGNGDKFTPIGKA VSNSAGTYATCSGSWSGNWLNYVTTSRIDALRKVLYGGYRQLDDTSQTVLRRAYIPQDGHSWAKEYTSVAVDGYDIANFTPLSAPANGTRLFFGNVTMTA GTNCSVLSSCSNLPPLLSVVKTADTTTRVWDWASSESPVLNNNTYGKGTRTNYTVQVAVCTSDYHDNDCQAYPNGQYKPVGLLHDFGADDAMLFGLLTGS YNKNMSGGVLRKVVSRFSTEVNANTGVFSANATIVRALDALRIRDYNNGSNGSAYRRGSYRAGIMPEGNYPDWGNPIAEMMYETLRYFAGKAAATAAFTG NNSDTGQNEDANVGLPQPAWDNPYASNSAANAHWCAKPNMLVMSNVNVSYDSDQLPGSAFASFSGDLSGLDVSAQARAISALEPSVAGQRYIGAVGSNED YAPTAKTVTTLANIRGLAPEEPTKQGSYYSASVARYGANTDLNSASGDQKTNTYVVALASSLPKFEFNVGGKTVSLVPFAKTINGVGTNRSRGNYQPTDA IVDLYVESYSSTGAVFRVNYEADEQGNDFDSDVIVKYDISVASGQLKVVVTPTAQSTGSNQNLGYVISGTNRDGAYLVTQDKNASLKYFLNVPPGQDAGY CNYSSEASMAASCAQLPWINGNPAASTQLFTPGNTAATTLNNPLWFAAKYGIAGRDTTGIVGDPDNYFLVTNAARLKSQLRAALSQILQNNNSVAAPAVL PSLSTSSGTTTNYDTYATGLNVTYWSGELTKTTVAIGTANGATNKTTTTAWKASTVMPAWTDRTILIPAVPGTGTGLRSFTYKNLADRTYDGKPLQTNLD ADKVDFLKGDASKEASLYRKRSSLLGDIVNSAPAVASGAQYLTSAANALEGATGDYATFKANQARVAPMVYVGANDGMLHGFNANTGKETFAFIPTAVIP NLYQLARSTYNDASASLHTYYVDGSPVIADVFFGQQWRKVLIGTLRGGGREVFALDITDPTSPKLLWEFTGADIRTNPANGSAQGVTNSRSDPTLGNSFG TPLVVRLHTGQWAVLFGNGYDGNGRKAALYALNVADGSAIGSNFPLVVEAGSKSNGLFNLKSLDVNSDGIADYVYGGDLQGNLWRFDLVADGNLTSSARA SDFKISFGGSPLYQARSRDKNGTVQPITAPPSLVRHPSGQGFVVMFGTGSYFSLEDKSSTDLQSIYGIWDKNVATVSTSNAAATTPTLNRASLQQQAFSQ ESSLSGKAVRVLSNNSVNWSAASGWYLDLAYGGVQLGERMVDPMTASGQALFFSTITPNSEVCAAGISGWTYAVDPSSGGRTTFNVFDLNGDGVVNAADS SNDTVISGFDMPAGGTTLSGSQLGSTDANLTTINKGPQASGRQTWRVIPQPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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