Pseudomonas sp. URMO17WK12:I4, H042_RS0122485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01398
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.8.540 FHIPEP family, domain 3 IPR042193 FHIPEP, domain 3 508 595 4.8E-26
Gene3D G3DSA:3.40.50.12790 FHIPEP family, domain 4 IPR042196 FHIPEP, domain 4 599 699 4.6E-23
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 70 89 8.5E-55
PANTHER PTHR30161 FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATED IPR001712 Type III secretion system FHIPEP 12 700 0.0
Gene3D G3DSA:3.40.30.60 FHIPEP family, domain 1 IPR042194 FHIPEP, domain 1 364 507 2.4E-53
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 137 153 8.5E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 237 251 8.5E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 186 203 8.5E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 156 174 8.5E-55
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 27 691 0.0
NCBIfam TIGR01398 JCVI: flagellar biosynthesis protein FlhA IPR006301 Flagellar biosynthesis protein FlhA 16 699 0.0
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 33 46 8.5E-55
PIRSF PIRSF005419 FlhA IPR001712 Type III secretion system FHIPEP 4 702 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.