Pseudomonas putida GB-1, PputGB1_2962

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_2962
Name
Replicon chromosome
Genomic location 3315024 - 3317567 (+ strand)

Cross-References

RefSeq YP_001669190.1
GI 167033959
Entrez 5870747
INSDC ABY98854.1
NCBI Locus Tag PputGB1_2962
UniParc UPI000164C280
UniProtKB Acc B0KFD1
UniProtKB ID B0KFD1_PSEPG
UniRef100 UniRef100_B0KFD1
UniRef50 UniRef50_A0A0B7D8W4
UniRef90 UniRef90_R9V1U0

Product

Feature Type CDS
Coding Frame 1
Product Name
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -12.73
Kyte-Doolittle Hydrophobicity Value -0.028
Molecular Weight (kDa) 93477.9
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 456 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003381 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_2962

Human Homologs

References

No references are associated with this feature.