Pseudomonas putida GB-1, PputGB1_2962

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	427	580	3.1E-44
SMART	SM00091	pas_2	IPR000014	PAS domain	303	368	1.6E-4
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	428	583	1.1415E-54
Pfam	PF05228	CHASE4 domain	IPR007892	CHASE4	61	212	2.4E-13
Pfam	PF00563	EAL domain	IPR001633	EAL domain	601	832	3.8E-65
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	598	844	6.8E-88
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	294	413	2.4E-14
CDD	cd01948	EAL	IPR001633	EAL domain	601	837	4.26777E-100
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	415	585	8.2E-60
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	293	413	5.33E-15
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	420	597	2.5E-53
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	600	844	8.5E-82
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	422	583	1.4E-38
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	291	836	0.0
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	431	586	3.14E-44
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	300	419	2.1E-6
SMART	SM00052	duf2_2	IPR001633	EAL domain	595	837	8.3E-104

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.