Pseudomonas putida GB-1, PputGB1_2609
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCAAGCTGGAGTCGGTGCTAGCCATCGAGATCCTGGTCGGCTGCCAGGCCCTGGACTTTCATGAGGTGGGCAAGGCCTCCAGTGCCACGCGTGCGCTCTA TGAACTGGTGCGCAGTCGCGTGCCAGTGGCCAATGAAGACCGCGCGTTCTACGCCGATATCGTTGCGGTGACTGAGCAACTACGCGAGGGCGAAGTGCTC GCAGTCATTGATCGCGTGCTTGCCAATCTGTGATTGCGTACCGGCCCGGTGGATATACCGGGCCGGCTCCGGAGTTTGTTGAGCGATCAAATCACCTGTG GCGAACCCTCAAATACACGATTTAACATAATATGCATTATGAGTAACTTCATATTTCAGTGCCGTACCGTGGACGGCCAGATGTTAAGCCAGCACAAGCT CCTCACTCATTCAAACCGTTGGCTTAATTGATCCAGGTTAAGGTTGGCTCACATTACCTTGAGTAAAATGCGAGCTCCGCACCCTCACGGGGAATCTGGC
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| DNA Sequence for Gene |
>PputGB1_2609
ATGACGATCATCGTAACCGGCGCCGCGGGATTCATCGGCAGCAATCTCGTTCAGGCACTCAACCAACGCAACGAGACCAATATCATTGCCGTCGACGATC TGACCGATGGCGACAAGTTCAGCAACCTGGCCGACAGTGAAATTGCCGATTACCTGGACAAGGACGATTTTCTCGACCGGTTCGGTCGCGGCCAGTTTGG CAAGGTGCGCGCCGTTCTGCACCAGGGTGCGTGTTCAAGCACCGTCGAAGGCGACGGTCGTTTCATGATGGACAACAACTACCGGTTCAGCCGTGAGTTG CTGACGTCTGCACAGCACCAGGAAATCCCGCTGCTATATGCATCATCGGCCGCCGTATACGGCGCAGGACGCATCTTTAGCGAACAGCGTGAGTGTGAAC GCCCGCTGAACGTCTATGGCTATTCCAAGTTTCTGTTCGATCAACAGGTGCGCCGGCAACTGACGGCGGCTCGCAGCCAGGTCGTCGGCTTGCGTTATTT CAATGTCTACGGGCCCCATGAGCAGCATAAAGGCCCGATGGCCTCAGTGGCCTTGCACTGCTTCAATCAGTACCAGGCTCGCGGAAAAGTCAGCTTGTTC GGTAGCTATGGGGACTTCCCCAGCGGTGGCCATCTGCGGGATTTCGTCTCTGTTGAGGATGTGGTCAAGGTCAATATGTTCTTCCTTGAACGACCACAAC TCAGTGGCATATTCAATGTTGGCAGTGGTCGTGCCCAGCCATTCAACGACGTTGCTCTGGCTGTGATCAATCGGCTGCGCGAACGGCAAGACCTACCCCC TTTGTCGCTTGATATGGCCTTGCTTGAGGGGGTACTGGAGTACAGCGAATTTCCTGATCATTTGCGTGGCAAATACCAGTGCTACACCTGTGCCGACCTG GAGCGCTTGCGCGCTGCTGGTTACAAGGCGCCTACATTGACAGTCCAGCAAGGCGTGGCCCGCTACTGTGACTGGTTGCAGGGTAACCAAAGCCCGCCGC CCGCTCCTTTCAAGCAAGCGGCGGCAGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTTGCGCATTTGTGTGGTTGGCAGATGCTTTTACCTGCTTTGGTGCGATTTATTGGTGAATTATTGACGATAACTACACTAAATAGTCATTTAGCGTAG TTATATAAAAGGTCAGGTTAATGCCTGCACTTTTTCTTCAGGCCAACCCACCAAAACGCTTGTAGAAGCTCTCGTTCACATCCGGCAATGGTCCGTCTGC GGTTTCCAGCGCAGCGTTCAACCATTCCTCTGCCTTGGCAAACACCAGCCGATAGAGATTGCGGCACAGTTGTCGCGCAGCCCTTCCCTCCCAATCTCCT GGCAGCAGCTCGTCCGGTAGTTGCGGGTCGCGCAGCAGCAGGCGGCGGTACTCGTGTATCAGCAGTGTGCGTGCAAGGAAGCAATCTTGCGCATCCAGCA GTTGTTGCTCTTTCAAACCTTGCCAAAGCGGCCTGAACAGCTGGATGAACTCGCTGTACTGCTCCCCCAGCTCTTCGATACGCCAGCTTTCCCGCACCTG
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| Amino Acid Sequence |
>ADP-L-glycero-D-manno-heptose-6-epimerase
MTIIVTGAAGFIGSNLVQALNQRNETNIIAVDDLTDGDKFSNLADSEIADYLDKDDFLDRFGRGQFGKVRAVLHQGACSSTVEGDGRFMMDNNYRFSREL LTSAQHQEIPLLYASSAAVYGAGRIFSEQRECERPLNVYGYSKFLFDQQVRRQLTAARSQVVGLRYFNVYGPHEQHKGPMASVALHCFNQYQARGKVSLF GSYGDFPSGGHLRDFVSVEDVVKVNMFFLERPQLSGIFNVGSGRAQPFNDVALAVINRLRERQDLPPLSLDMALLEGVLEYSEFPDHLRGKYQCYTCADL ERLRAAGYKAPTLTVQQGVARYCDWLQGNQSPPPAPFKQAAAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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