Pseudomonas putida GB-1, PputGB1_2609

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05248
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008712 ADP-glyceromanno-heptose 6-epimerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05248
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050661 NADP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05248
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppg01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppg00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR02197 JCVI: ADP-glyceromanno-heptose 6-epimerase IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase 3 327 4.5E-129
Gene3D G3DSA:3.90.25.10 - - - 167 309 2.9E-129
CDD cd05248 ADP_GME_SDR_e IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase 2 326 0.0
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 1 329 7.05E-57
Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase 2 329 47.594307
Pfam PF01370 NAD dependent epimerase/dehydratase family IPR001509 NAD-dependent epimerase/dehydratase 3 241 3.6E-40
PANTHER PTHR43103 NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE - - 2 325 9.5E-53
Gene3D G3DSA:3.40.50.720 - - - 4 322 2.9E-129

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.