Pseudomonas otitidis LNU-E-001, CR65_RS0125850
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1268 | 1407 | 3.1E-11 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 227 | 263 | 0.0012 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1199 | 1266 | 9.5E-9 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 265 | 302 | 2.8E-6 |
| SUPERFAMILY | SSF56266 | DmpA/ArgJ-like | IPR016117 | ArgJ-like domain superfamily | 1601 | 1729 | 2.2E-5 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 22 | 60 | 8.3E-4 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 686 | 706 | - |
| Pfam | PF04830 | Possible hemagglutinin (DUF637) | IPR006915 | Domain of unknown function DUF637, haemagglutinin putative | 1554 | 1727 | 3.2E-27 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 686 | 703 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1403 | 1425 | - |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1149 | 1182 | 0.43 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1063 | 1100 | 0.0049 |
| NCBIfam | TIGR01731 | JCVI: filamentous hemagglutinin 20-residue repeat (two copies) | IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | 1082 | 1118 | 0.24 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.