Pseudomonas fluorescens SBW25, PFLU5651 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5651
Name
soxB
Replicon chromosome
Genomic location 6191329 - 6192579 (- strand)

Cross-References

RefSeq YP_002875145.1
GI 229593026
EC Number 1.5.3.1
Entrez 7822171
INSDC CAY52966.1
UniParc UPI00019DAE80
UniProtKB Acc C3K399
UniProtKB ID C3K399_PSEFS
UniRef100 UniRef100_A0A0D0TRQ2
UniRef50 UniRef50_O87388
UniRef90 UniRef90_Q9HTE8

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) 5.93
Kyte-Doolittle Hydrophobicity Value -0.170
Molecular Weight (kDa) 45.2
Isoelectric Point (pI) 8.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 293 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004970 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5651
Search term: soxB

Human Homologs

References

No references are associated with this feature.