Pseudomonas fluorescens SBW25, PFLU5651 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046653 tetrahydrofolate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01373
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008115 sarcosine oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01373
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01266
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.9.10 - - - 115 347 1.3E-109
NCBIfam TIGR01373 JCVI: sarcosine oxidase subunit beta family protein IPR006278 Sarcosine oxidase subunit beta 3 408 0.0
Gene3D G3DSA:3.50.50.60 - IPR036188 FAD/NAD(P)-binding domain superfamily 34 389 1.3E-109
Pfam PF01266 FAD dependent oxidoreductase IPR006076 FAD dependent oxidoreductase 34 380 4.4E-54
PANTHER PTHR13847 SARCOSINE DEHYDROGENASE-RELATED - - 26 408 6.4E-31
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain IPR036188 FAD/NAD(P)-binding domain superfamily 33 402 1.79E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.