Pseudomonas fluorescens SBW25, PFLU5416 (lipA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5416
Name
lipA
Replicon chromosome
Genomic location 5950417 - 5951442 (- strand)

Cross-References

RefSeq YP_002874914.1
GI 229592795
Entrez 7817539
INSDC CAY52590.1
UniParc UPI00019DB062
UniProtKB Acc C3K2L8
UniProtKB ID LIPA_PSEFS
UniRef100 UniRef100_C3K2L8
UniRef50 UniRef50_Q9JZA5
UniRef90 UniRef90_Q87VW7

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoyl synthase
Synonyms
Evidence for Translation
Charge (pH 7) 3.20
Kyte-Doolittle Hydrophobicity Value -0.269
Molecular Weight (kDa) 38.2
Isoelectric Point (pI) 7.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 495 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001687 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5416
Search term: lipA
Search term: lipoyl synthase

Human Homologs

Ensembl 110, assembly GRCh38.p14
lipoic acid synthetase [Source:HGNC Symbol;Acc:HGNC:16429]
E-value: 3.2e-74
Percent Identity: 47.9

References

No references are associated with this feature.