Pseudomonas fluorescens SBW25, PFLU5266 (carA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCCGTGAAGGCCATACCGGTGCGCGTGCGCGTGACACCATTGGTTTTGCAACCGTGCGCGGTGGCGATGTGGTGGGTGATCACACCGTATTGTTCGCC AGCGAGGGCGAGCGCCTGGAAATCACGCACAAGGCGTCCAGCCGCATGACGTTTGCCAAGGGGGCGGTACGTGCTGCGCTCTGGCTGGAAGGTCGTGCGG CGGGCCTTTATGACATGCGTGACGTGCTGGATCTGCACTAATCAGTAGCTAAAACAGGGGCTCAAGCTTATGCTTAGGCCCCGTTTTTACCCGCTAAGCG ACGTCCTGTCGCATTCCCCTGCCTTTAAGGCTCATTAGCGGTGGACCAAAAAAGCCTTTTTCTGTAAGCTACAGCTTTAGTGTGTCCACTAAAAGCGCGC AGAATAATTCAGTGAAGAAGCGGGGTGACGTGTCCATACGTCACTCCGCTTTTTTACAACCTGCGATCGCCCTTTCAGGCTTTATTTACGGGAGGTCTTC
|
|
| DNA Sequence for Gene |
>PFLU5266
|carA
TTGACTAAGCCAGCCATACTCGCCCTTGCTGATGGCAGCATCTTTCGCGGCGAAGCCATTGGAGCCGACGGTCAAACCGTTGGAGAGGTGGTGTTTAACA CTGCCATGACCGGCTATCAGGAAATCCTTACCGATCCTTCCTACGCCCAACAGATCGTTACCCTGACCTATCCGCACATCGGCAACACCGGTACGACACC GGAAGATGTCGAGTCTGATCGTGTCTGGTCGGCCGGTCTGGTGATTCGTGACCTGCCGCTGGTTGCGAGCAACTGGCGTAACACGATGTCGCTGTCCGAT TACCTGAAAGCCAACAACGTTGTGGCGATCGCCGGTATCGATACGCGTCGCCTGACACGCATCCTGCGTGAGAAAGGCTCGCAGAACGGCTGCATCATGG TCGGTGACAATATTTCCGAAGAGGCGGCGATTGCCGCAGCCCAAGGCTTCCCTGGCCTGAAGGGCATGGACCTGGCGAAAGTCGTCAGCGTCAAAGAGAA GTACGAGTGGCGCTCCACTGTCTGGGACTTGAAGACCGATAGCCACGCGACCATCGATGCGGCCGAGTTGCCTTACCTCGTGGTCGCCTACGACTACGGC GTCAAGTACAACATCCTGCGCATGCTGGTCGAGCGCGGTTGCCGCGTGACCGTGGTGCCGGCGCAAACCCCGGCCAGCGACGTGCTCGCCCTGCAGCCGG ACGGTGTGTTCCTGTCCAACGGCCCGGGTGACCCTGAGCCTTGCGACTACGCTATCCAGGCGATCAAAGAAGTGCTGGAGACCGAGATTCCGGTATTCGG TATCTGCCTCGGTCACCAGCTGCTGGCCCTGGCCTCTGGCGCCAAGACCCTGAAAATGGGGCACGGCCATCACGGTGCCAACCACCCTGTGCAAGACCTG GACACCGGCATTGTGATGATCACCAGCCAGAACCACGGTTTTGCGGTGGATGAAGCGACCCTGCCGAGCAACGTTCGCGCGATTCACAAGTCGCTGTTCG ACGGTTCCCTGCAGGGCATCGAGCGCACCGACAAGAGCGCGTTCAGCTTCCAGGGCCACCCTGAAGCCAGCCCGGGCCCGAACGACGTAGCGCCGCTGTT CGACCGTTTCATCAATGAGATGGCCAAGCGACGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTGAGCGGCTTGCGGGCGGCCCCGAGCTTCGGTGGCCCCCGCAGGCTCATCAAAGATTGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACA AACCCATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCA GGCCTGTAAAGCCCTGCGCGAAGAGGGTTACCGCGTCATCCTGGTGAACTCTAACCCGGCCACTATCATGACCGACCCGGACATGGCCGACGCCACCTAC ATCGAGCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAAGAACGTCCGGACGCACTGCTGCCAACCATGGGTGGCCAGACCGCCCTGAACTGCG CATTGGACCTGGAGCGCGAAGGCGTCCTGGAAAAGTTTGGCGTAGAGATGATCGGCGCCAATGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTT
|
|
| Amino Acid Sequence |
>carbamoyl phosphate synthase small subunit
MTKPAILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTGTTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSD YLKANNVVAIAGIDTRRLTRILREKGSQNGCIMVGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTVWDLKTDSHATIDAAELPYLVVAYDYG VKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNGPGDPEPCDYAIQAIKEVLETEIPVFGICLGHQLLALASGAKTLKMGHGHHGANHPVQDL DTGIVMITSQNHGFAVDEATLPSNVRAIHKSLFDGSLQGIERTDKSAFSFQGHPEASPGPNDVAPLFDRFINEMAKRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|