Pseudomonas fluorescens SBW25, PFLU4632 (prpB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4632
Name
prpB
Replicon chromosome
Genomic location 5110675 - 5111568 (- strand)

Cross-References

RefSeq YP_002874153.1
GI 229592034
Entrez 7818119
INSDC CAY51397.1
UniParc UPI00019DAA04
UniProtKB Acc C3K142
UniProtKB ID C3K142_PSEFS
UniRef100 UniRef100_C3K142
UniRef50 UniRef50_Q56062
UniRef90 UniRef90_Q88KF6

Product

Feature Type CDS
Coding Frame 1
Product Name
2-methylisocitrate lyase
Synonyms
Evidence for Translation
Charge (pH 7) -4.13
Kyte-Doolittle Hydrophobicity Value -0.020
Molecular Weight (kDa) 32.1
Isoelectric Point (pI) 5.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 344 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000769 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4632
Search term: prpB

Human Homologs

References

No references are associated with this feature.