Pseudomonas fluorescens SBW25, PFLU4612

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.40.160.20	-	-	-	16	182	5.3E-40
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	266	282	5.8E-18
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	212	324	3.4E-32
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	221	315	1.2E-24
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	195	320	3.53E-41
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	251	266	5.8E-18
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	266	283	3.1E-7
Pfam	PF05736	OprF membrane domain	IPR008722	Outer membrane porin F, N-terminal	1	185	7.5E-98
SUPERFAMILY	SSF56925	OMPA-like	IPR011250	Outer membrane protein/outer membrane enzyme PagP, beta-barrel	36	186	6.8E-20
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	205	325	6.4E-43
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	221	243	5.8E-18
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	284	303	3.1E-7
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	304	324	3.1E-7
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	216	321	6.2783E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.