Pseudomonas fluorescens SBW25, PFLU4420 (flhA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens SBW25 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGGTTCGCGGACCGGTTACCAATGGACCCGGCATACCCGAGGGTATCCCGCGCACAGCCACCATAAGGCCGCACAGTAGACGATAAAAAGGCGTCAAC TGAAAGCGGACAATGGCGCTTCTGCGCATTGGTAAGCCGGGCCGCGACGCCCGACCACTGCGTTTGCAGCGGTGTACGGAGACTAGAGAGCGGCTTTCCT AGGGGCAACCGCAAAACCTTGTCAGAAATTTCCTCATCTCTACCCGCGAACCCCTGTGGTGAGGGAGCTTGCTCCCGCTGGGGCGCGTAGCGCCCCCAAA TCCTATGTATGCGATCGGTCAGGTAAATCGCATCGGCTGGTTTTGGGGCTGCTACGCAGCCCAGCGGGAGCAAGCTCCCTCGCCACAGGTGCGACATGAT CTGCGGCATGGGGCAAAAGTTGGAAGGCTTCTTGCAATACCGCCTGCAGGACGCCTCCCGGCGTCAAAAGTTTGCTTCAAGGAAACGAGGAATACCGGTG
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| DNA Sequence for Gene |
>PFLU4420
|flhA
GTGGATCGCTCTCAAATGTTCGGCACGGCCCGTACCACCCTGACTGACCTCTCGCGGGGCAATCTGGGTGTGCCGTTGTTGTTGCTGGTCATGCTGGCAA TGATGATGTTGCCGATGCCGCCGTTCCTGTTGGACGTGTTCTTCACCTTCAACATCGCCCTGTCGGTGGTGGTGCTGCTGGTGTGCGTCTACGCCTTGCG GCCGCTGGATTTCGCGGTATTCCCCACCATTTTGCTGGTCGCGACCCTGTTGCGCCTGGCGCTGAACGTGGCGTCGACCCGTGTGGTCATGCTCCACGGC CAGGACGGCCACGCCGCCGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCGTGGTGTTTGCGATCCTGA TGATCATCAACTTCGTGGTGGTGACCAAGGGCGCCGGGCGGATCTCCGAGGTGAGCGCGCGCTTTACCCTCGACGCCATGCCCGGCAAACAGATGGCCAT CGACGCCGACCTCAACGCCGGCCTGATCGACCAGAACCAAGCTAAAACCCGTCGTTTGGAAGTCGCCCAGGAAGCCGAGTTCTACGGCTCCATGGACGGT GCCAGTAAATTCGTGCGCGGTGACGCCATTGCGGGCCTGCTGATTCTGTTCATCAACCTCATCGGCGGCATGGCAGTCGGCATCTTCCAACACGGTATGA CTTTCGGCGATGCGGGCAAGGTGTACGCCTTGCTGACCATCGGTGACGGTTTAGTGGCGCAATTGCCATCACTGTTGTTATCCACAGCAGCGGCGATCAT GGTGACCCGTGCTTCGGGCTCCGAAGACATGGGCAAGCAGATCAGCCGCCAGATGTTCGCCTCGCCCAAGGCGCTGGCCGTGGCGGCGGGCATTATGGCG ATCATGGGCATCGTGCCGGGCATGCCGCACGTGTCGTTCCTCAGCATGGCTGCGCTGGCCGGTGGCGGTGCGTACCTGTTCTGGAAGAAGCAGAACGCCG TCAAGGTTCAAGCCTTGCAGGAAGTCGCGCGCCAGCAGGAGCTGCTGCCATCCCCGGCCCGCGCCCAGGAAACCAAGGAGCTTGGCTGGGATGACGTGAC CCCGATCGACATGATCGGCCTGGAAGTCGGCTATCGCCTGATTCCGCTGGTGGACCGCAACCAGGGCGGGCAATTGCTCGCGCGGATCAAGGGTGTGCGC AAGAAGCTGTCCCAGGACCTGGGCTTTTTGATGCCCACTGTGCATATCCGCGACAACCTCGACCTGGCGCCCAGTGCCTACCGCTTGACGCTGATGGGCG TGATTCTGGCCGAAGCCGAGATCTACCCGGACCGCGAGCTGGCGATCAACCCTGGGCAGGTGTTCGGCAGCCTCAATGGCATCACCGCCAAAGATCCGGC TTTTGGCCTGGAAGCGGTATGGATCGAAATCAGCCAGCGCAGCCAGGCCCAGTCGCTCGGCTATACCGTGGTGGACGCCAGCACCGTGGTTGCCACTCAC CTTAACCAGATTCTGTACAAGCACTCCCATGAGCTGATCGGCCACGAGGAAGTCCAGCAATTGATGGGTTTGCTCGGCAAAGCCTCACCAAAACTCGCCG AAGAGCTGGTGCCGGGCGTGCTGTCGTTGTCGCAATTGCTCAAAGTGCTGCAGGCGCTGCTGGCCGAACAAGTGCCGGTACGCGACATTCGCAGCATCGC CGAGGCCATCGCCAACAACGCCGCCAAGAGTCAAGATACTGCCGCCTTGGTGGCTGCGGTGCGCGTCGGATTGTCGCGTGCAATCGTGCAAAGCATTGTA GGGCTTGACTCCGAGCTGCCTGTGATCACCTTGGAACCAAGGTTGGAACAAATATTGCTCAATAGTATTCAGAAGGCAGGACAAGGCCAGGAAGAGGGCG TTCTGCTGGAGCCAAGCATGGCTGAGAAGCTGCAGCGTTCGTTGATCGACGCCGCACAGCGCCAGGAAATGCAGGGCCAACCGGTGATCCTGCTGGTGGC AGGCCCCGTCCGGGCGATGTTGTCGCGGTTTGGGCGCCTGGCAGTACCGAATTTGCACGTTTTGGCTTATCAGGAAATTCCTGACAACAAGCAAGTGACT ATCGTCGCGACAGTAGGGCCCAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGTAGTGGGTTATGCAAGTTAAGCGTTTTTTCGCCGCCGATATGCGTCAGGCCATGAAACTGGTTCGTGATGAGCTGGGCGCCGACGCCGCGATTATCG GAAACCGTCGTATTGCCGGCGGTGTCGAGCTGACGGCTGCCCTGGATTACACCCCCCAGGCCCTGGCGCCACGCGTGCCGAACATGGAGCTTGAAGACGA GCTGCGCAAGACCGCTTCGCGCATTGTCTCGGCCCAGGCTGAGCTGAGCATGCGGGGCGACAGCGATGCCACCACCAATCGCCAGTTGTTCGCCGGCTTG CCGTTGACCGCTGCCGAGCCGCTGGTCGAGCCCACCTTCAAAGAGCCGCCACGTCCGGCCGCGCCTGCCCCGGCTGCGGCTGTTGACCAGCGCGTGTTCG ACTCGATGCGCTTTGAACTCAACGGCTTGCGCGAACTGCTCGAAGTGCAGCTTGGCTCGCTGGCCTGGACCCAATTGCAAGGCAGCAAGCCGCAACAGGC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRSQMFGTARTTLTDLSRGNLGVPLLLLVMLAMMMLPMPPFLLDVFFTFNIALSVVVLLVCVYALRPLDFAVFPTILLVATLLRLALNVASTRVVMLHG QDGHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQNQAKTRRLEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMAVGIFQHGMTFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKQISRQMFASPKALAVAAGIMA IMGIVPGMPHVSFLSMAALAGGGAYLFWKKQNAVKVQALQEVARQQELLPSPARAQETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGSLNGITAKDPAFGLEAVWIEISQRSQAQSLGYTVVDASTVVATH LNQILYKHSHELIGHEEVQQLMGLLGKASPKLAEELVPGVLSLSQLLKVLQALLAEQVPVRDIRSIAEAIANNAAKSQDTAALVAAVRVGLSRAIVQSIV GLDSELPVITLEPRLEQILLNSIQKAGQGQEEGVLLEPSMAEKLQRSLIDAAQRQEMQGQPVILLVAGPVRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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