Pseudomonas fluorescens SBW25, PFLU4420 (flhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01398
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00949
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 161 179 3.5E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 38 51 3.5E-55
Pfam PF00771 FHIPEP family IPR001712 Type III secretion system FHIPEP 31 697 0.0
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 191 208 3.5E-55
PANTHER PTHR30161 FLAGELLAR EXPORT PROTEIN, MEMBRANE FLHA SUBUNIT-RELATED IPR001712 Type III secretion system FHIPEP 14 706 0.0
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 75 94 3.5E-55
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 242 256 3.5E-55
PIRSF PIRSF005419 FlhA IPR001712 Type III secretion system FHIPEP 5 708 0.0
Gene3D G3DSA:3.40.30.60 FHIPEP family, domain 1 IPR042194 FHIPEP, domain 1 370 513 8.7E-51
Gene3D G3DSA:3.40.50.12790 FHIPEP family, domain 4 IPR042196 FHIPEP, domain 4 605 705 1.2E-24
PRINTS PR00949 Type III secretion system inner membrane A protein family signature IPR001712 Type III secretion system FHIPEP 142 158 3.5E-55
NCBIfam TIGR01398 JCVI: flagellar biosynthesis protein FlhA IPR006301 Flagellar biosynthesis protein FlhA 21 705 0.0
Gene3D G3DSA:1.10.8.540 FHIPEP family, domain 3 IPR042193 FHIPEP, domain 3 514 601 3.0E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.