Pseudomonas fluorescens SBW25, PFLU0621

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0621
Name
Replicon chromosome
Genomic location 705432 - 707102 (- strand)

Cross-References

RefSeq YP_002870289.1
GI 229588170
Entrez 7819107
INSDC CAY46890.1
UniParc UPI00019DA228
UniProtKB Acc C3K6X0
UniProtKB ID C3K6X0_PSEFS
UniRef100 UniRef100_C3K6X0
UniRef50 UniRef50_G8Q613
UniRef90 UniRef90_G8Q613

Product

Feature Type CDS
Coding Frame 1
Product Name
putative GGDEF domain response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.60
Kyte-Doolittle Hydrophobicity Value -0.326
Molecular Weight (kDa) 62945.2
Isoelectric Point (pI) 6.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 603 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004473 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0621

Human Homologs

References

No references are associated with this feature.