Pseudomonas fluorescens SBW25, PFLU0181 (gabT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003867 4-aminobutyrate transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00700
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009448 gamma-aminobutyric acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00700
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008483 transaminase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00202
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00202
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF000521 Transaminase_4ab_Lys_Orn IPR005814 Aminotransferase class-III 123 158 0.48
Pfam PF00202 Aminotransferase class-III IPR005814 Aminotransferase class-III 17 421 0.0
FunFam G3DSA:3.40.640.10:FF:000013 4-aminobutyrate aminotransferase - - 60 319 2.6E-123
FunFam G3DSA:3.90.1150.10:FF:000022 4-aminobutyrate aminotransferase - - 301 419 4.7E-36
Gene3D G3DSA:3.40.640.10 - IPR015421 Pyridoxal phosphate-dependent transferase, major domain 60 319 0.0
PIRSF PIRSF000521 Transaminase_4ab_Lys_Orn IPR005814 Aminotransferase class-III 172 425 4.4E-41
PIRSF PIRSF000521 Transaminase_4ab_Lys_Orn IPR005814 Aminotransferase class-III 20 130 0.002
PANTHER PTHR11986 AMINOTRANSFERASE CLASS III - - 7 423 1.1E-104
NCBIfam TIGR00700 JCVI: 4-aminobutyrate--2-oxoglutarate transaminase IPR004632 4-aminobutyrate aminotransferase, bacterial 10 422 0.0
Gene3D G3DSA:3.90.1150.10 Aspartate Aminotransferase, domain 1 IPR015422 Pyridoxal phosphate-dependent transferase, small domain 7 418 0.0
SUPERFAMILY SSF53383 PLP-dependent transferases IPR015424 Pyridoxal phosphate-dependent transferase 22 424 0.0
CDD cd00610 OAT_like IPR005814 Aminotransferase class-III 8 422 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.