Pseudomonas fluorescens F113, PSF113_5204

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005576 extracellular region
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02917
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003950 NAD+ ADP-ribosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02917
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF20148 Domain of unknown function (DUF6531) IPR045351 Domain of unknown function DUF6531 445 518 5.7E-19
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 867 905 1.4E-5
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 1264 1294 2.8E-8
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 829 862 1.5E-4
Gene3D G3DSA:2.180.10.10 - - - 958 1450 4.5E-98
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 888 929 8.4E-8
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 1264 1297 1.1E-7
MobiDBLite mobidb-lite consensus disorder prediction - - 1466 1487 -
PANTHER PTHR32305 - - - 815 1452 2.0E-40
MobiDBLite mobidb-lite consensus disorder prediction - - 381 447 -
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 805 840 6.6E-6
Pfam PF03527 RHS protein IPR001826 RHS protein 1347 1380 3.3E-15
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 888 917 2.4E-6
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 743 776 2.0E-6
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 1419 1438 4.6E-12
Coils Coil Coil - - 235 255 -
NCBIfam TIGR03696 JCVI: RHS repeat-associated core domain IPR022385 Rhs repeat-associated core 1372 1451 6.5E-25
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 805 841 4.0E-5
Gene3D G3DSA:3.90.930.1 - - - 791 955 1.4E-5
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 846 886 2.2E-4
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 867 904 3.3E-8
Pfam PF02917 Pertussis toxin, subunit 1 IPR003898 Bordetella pertussis toxin A 1491 1550 4.0E-8
SUPERFAMILY SSF56399 ADP-ribosylation - - 1489 1604 7.91E-18
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 722 762 4.3E-4
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 1021 1053 2.9E-7
SUPERFAMILY SSF69304 Tricorn protease N-terminal domain - - 705 981 2.35E-6
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 635 676 0.0033
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 846 881 9.6E-5
Gene3D G3DSA:3.90.210.10 - - - 1470 1618 2.2E-27
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 1339 1359 4.6E-12
NCBIfam TIGR01643 JCVI: YD repeat (two copies) IPR006530 YD repeat 1041 1072 1.8E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 424 447 -
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 1396 1416 4.6E-12
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 909 946 9.5E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.