Pseudomonas fluorescens F113, PSF113_4609 (ompA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens F113 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGGCCCGGGCATCAACACCGAACCGTTCTGGGGCAAGGATGGCTCGACCATCTACTTCACCTCCGACCGCGGCGGCAAGCCACAGATCTACAAGACCAGT GCCGGTGGTGGCGGTGCCGAACGCGTGACGTTCGTCGGTAACTACAACGCCAACCCTAAACTGTCGGCGGACGAAAAGACCCTGGTGATGATCCATCGCC AGGATGGTTTCACCAATTTCAAGGTGGCGGCCCAGGATTTGCAGCGCGGTAGCGTAAAAATCCTCACTGATAGCACTCTGGACGAGTCACCCACTGTTGC GCCCAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCCATTAACGGACGCGTGAGGCTCCCGCTTCCTACC GCTCAAGGCGAAGTCAGAGAACCGTCCTGGTCCCCTTACCTGAACTGACGCGGCGCTATACGTTTTACTTAACACACTGGGGTTCATTAGGAGTTTCACG
DNA Sequence for Gene
>PSF113_4609 |ompA
ATGGAAATGCTGAAGTTTGGTAAATTTGCTGCGCTGGCTCTGGCCATGGCTGTAGCTGTAGGTTGCTCGTCCAAAGGCGGCGACAATGCCGGTGAAGGCG CTGTTGATCCAAACGCTGGTTACGGCGCTAACACCGGTGCAGTTGACGGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCAATCACCACCTTCTACTTCGA ATACGACAGCTCGGACCTGAAGCCAGAAGCCATGCGCGCTCTGGACGTTCACGCCAAAGACCTGAAGTCGAACGGCGCTCGCGTTGTTCTGGAAGGCAAC ACCGACGAACGTGGTACTCGTGAGTACAACATGGCACTGGGCGAGCGTCGTGCGAAAGCCGTTCAACGCTACCTGGTACTGCAAGGTGTTTCCCCAGCTC AGCTGGAACTGGTTTCCTACGGCGAAGAGCGTCCAGTTGCTACCGGCAACGACGAGCAGTCCTGGGCTCAAAACCGTCGCGTCGAACTGCGTAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCGTCATGCGAACGTGCCGTCGTGCTGTAACTGTTCTGGCTCTCAGCCTCGCGCCGCTTGCGGCGTGGGCTGCGGTTCCTGTGGTCGATAACGATGCCG GCTATAACAATAGCGGGAGCAGCTATCCGCCTGCAGGTTACGGTACGAACGGCGCCTATGCCGGGGGAGGGGTTTCGGCCCCTGTCTCGGCACAGGGCGA GCTGTTCAACCAGCTCCAGCAAATGCAGGATCAGCTGTCGCGCCAGCAAGGCGTGATCGAAGTTCTGCAGAATGATATTTCGCGCATGAAGCAGGAAAAC CTGGAGCGATACCAGGATCTTGATCGGCGCATAGGATCCGGCGTTGCACCTGCCGCGACTCCCGAGAATTCTCCAGCCGGTGGCGACTTGAACGCCCCCG GTGCAGCCGCAGGCGCGGGGGCAGCCGCTCCTGCAGCACCTGCCGCCGGTGGCGAGCCGGCTGATCCGGCGAAGGAAAAGCTCTATTACGATGCTGCCTT
Amino Acid Sequence
>OmpA/MotB protein
MEMLKFGKFAALALAMAVAVGCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKSNGARVVLEGN TDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site