Pseudomonas fluorescens F113, PSF113_4609 (ompA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4609
Name
ompA
Replicon chromosome
Genomic location 5366459 - 5366956 (- strand)

Cross-References

RefSeq YP_005209993.1
GI 378952505
Entrez 11832712
INSDC AEV64598.1
NCBI Locus Tag PSF113_4609
UniParc UPI0002041EE5
UniProtKB Acc G8Q7Z2
UniProtKB ID G8Q7Z2_PSEFL
UniRef100 UniRef100_A0A0D0SX40
UniRef50 UniRef50_P0A138
UniRef90 UniRef90_P0A138

Product

Feature Type CDS
Coding Frame 1
Product Name
OmpA/MotB protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.79
Kyte-Doolittle Hydrophobicity Value -0.421
Molecular Weight (kDa) 17.7
Isoelectric Point (pI) 4.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 401 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000938 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4609
Search term: ompA
Search term: OmpA/MotB protein

Human Homologs

References

No references are associated with this feature.