Pseudomonas fluorescens Pf0-1, Pfl01_4876

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_4876
Name
Replicon	chromosome
Genomic location	5496043 - 5499891 (+ strand)

Cross-References

RefSeq	YP_350604.1
GI	77461097
Entrez	3716235
INSDC	ABA76613.1
NCBI Locus Tag	Pfl01_4876
UniParc	UPI00005C7CAE
UniProtKB Acc	Q3K6J1
UniProtKB ID	Q3K6J1_PSEPF
UniRef100	UniRef100_Q3K6J1
UniRef50	UniRef50_Q9HVI8
UniRef90	UniRef90_A0A0B7DIB5

Product

Feature Type	CDS
Coding Frame	1
Product Name	PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7)	-23.86
Kyte-Doolittle Hydrophobicity Value	-0.254
Molecular Weight (kDa)	145199.8
Isoelectric Point (pI)	5.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004258 (973 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_4876 Search term: PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase

Human Homologs

References