Pseudomonas sp. GM30, PMI25_004151
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 221 | 236 | - |
| SUPERFAMILY | SSF56935 | Porins | - | - | 44 | 678 | 5.8E-94 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 164 | 678 | 6.5E-68 |
| PANTHER | PTHR30069 | TONB-DEPENDENT OUTER MEMBRANE RECEPTOR | IPR039426 | TonB-dependent receptor-like | 24 | 678 | 9.0E-73 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 212 | 676 | 1.6E-44 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 44 | 160 | 3.6E-28 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 47 | 150 | 1.9E-19 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 216 | 245 | - |
| CDD | cd01347 | ligand_gated_channel | - | - | 51 | 678 | 3.44381E-56 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.